Genome sequence of the white-rot fungus Irpex lacteus F17, a type strain of lignin degrader fungus

Irpex lacteus, a cosmopolitan white-rot fungus, degrades lignin and lignin-derived aromatic compounds. In this study, we report the high-quality draft genome sequence of I. lacteus F17, isolated from a decaying hardwood tree in the vicinity of Hefei, China. The genome is 44,362,654 bp, with a GC con...

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Detalles Bibliográficos
Autores principales: Yao, Mengwei, Li, Wenman, Duan, Zihong, Zhang, Yinliang, Jia, Rong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2017
Materias:
Short Genome Report
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5596461/
https://www.ncbi.nlm.nih.gov/pubmed/28919942
http://dx.doi.org/10.1186/s40793-017-0267-x
Descripción
Sumario:Irpex lacteus, a cosmopolitan white-rot fungus, degrades lignin and lignin-derived aromatic compounds. In this study, we report the high-quality draft genome sequence of I. lacteus F17, isolated from a decaying hardwood tree in the vicinity of Hefei, China. The genome is 44,362,654 bp, with a GC content of 49.64% and a total of 10,391 predicted protein-coding genes. In addition, a total of 18 snRNA, 842 tRNA, 15 rRNA operons and 11,710 repetitive sequences were also identified. The genomic data provides insights into the mechanisms of the efficient lignin decomposition of this strain. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s40793-017-0267-x) contains supplementary material, which is available to authorized users.

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