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Isomorphous crystal structures of chlorodi­acetyl­ene and iododi­acetyl­ene derivatives: simultaneous hydrogen and halogen bonds on carbon­yl

The crystal structures of tert-butyl (5-chloro­penta-2,4-diyn-1-yl)carbamate, C(10)H(12)ClNO(2) (II), and tert-butyl (5-iodo­penta-2,4-diyn-1-yl)carbamate, C(10)H(12)INO(2) (IV), are isomorphous to previously reported structures and accordingly their mol­ecular and supra­molecular structures are sim...

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Autores principales: Baillargeon, Pierre, Rahem, Tarik, Caron-Duval, Édouard, Tremblay, Jacob, Fortin, Cloé, Blais, Étienne, Fan, Victor, Fortin, Daniel, Dory, Yves L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5598843/
https://www.ncbi.nlm.nih.gov/pubmed/28932431
http://dx.doi.org/10.1107/S2056989017010155
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author Baillargeon, Pierre
Rahem, Tarik
Caron-Duval, Édouard
Tremblay, Jacob
Fortin, Cloé
Blais, Étienne
Fan, Victor
Fortin, Daniel
Dory, Yves L.
author_facet Baillargeon, Pierre
Rahem, Tarik
Caron-Duval, Édouard
Tremblay, Jacob
Fortin, Cloé
Blais, Étienne
Fan, Victor
Fortin, Daniel
Dory, Yves L.
author_sort Baillargeon, Pierre
collection PubMed
description The crystal structures of tert-butyl (5-chloro­penta-2,4-diyn-1-yl)carbamate, C(10)H(12)ClNO(2) (II), and tert-butyl (5-iodo­penta-2,4-diyn-1-yl)carbamate, C(10)H(12)INO(2) (IV), are isomorphous to previously reported structures and accordingly their mol­ecular and supra­molecular structures are similar. In the crystals of (II) and (IV), mol­ecules are linked into very similar two-dimensional wall organizations with anti­parallel carbamate groups involved in a combination of hydrogen and halogen bonds (bifurcated N—H⋯O=C and C≡C—X⋯O=C inter­actions on the same carbonyl group). There is no long-range parallel stacking of diynes, so the topochemical polymerization of di­acetyl­ene is prevented. A Cambridge Structural Database search revealed that C≡C—X⋯O=C contacts shorter than the sum of the van der Waals radii are scarce (only one structure for the C≡C—Cl⋯O=C inter­action and 13 structures for the similar C≡C—I⋯O=C inter­action).
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spelling pubmed-55988432017-09-20 Isomorphous crystal structures of chlorodi­acetyl­ene and iododi­acetyl­ene derivatives: simultaneous hydrogen and halogen bonds on carbon­yl Baillargeon, Pierre Rahem, Tarik Caron-Duval, Édouard Tremblay, Jacob Fortin, Cloé Blais, Étienne Fan, Victor Fortin, Daniel Dory, Yves L. Acta Crystallogr E Crystallogr Commun Research Communications The crystal structures of tert-butyl (5-chloro­penta-2,4-diyn-1-yl)carbamate, C(10)H(12)ClNO(2) (II), and tert-butyl (5-iodo­penta-2,4-diyn-1-yl)carbamate, C(10)H(12)INO(2) (IV), are isomorphous to previously reported structures and accordingly their mol­ecular and supra­molecular structures are similar. In the crystals of (II) and (IV), mol­ecules are linked into very similar two-dimensional wall organizations with anti­parallel carbamate groups involved in a combination of hydrogen and halogen bonds (bifurcated N—H⋯O=C and C≡C—X⋯O=C inter­actions on the same carbonyl group). There is no long-range parallel stacking of diynes, so the topochemical polymerization of di­acetyl­ene is prevented. A Cambridge Structural Database search revealed that C≡C—X⋯O=C contacts shorter than the sum of the van der Waals radii are scarce (only one structure for the C≡C—Cl⋯O=C inter­action and 13 structures for the similar C≡C—I⋯O=C inter­action). International Union of Crystallography 2017-07-17 /pmc/articles/PMC5598843/ /pubmed/28932431 http://dx.doi.org/10.1107/S2056989017010155 Text en © Baillargeon et al. 2017 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/2.0/uk/
spellingShingle Research Communications
Baillargeon, Pierre
Rahem, Tarik
Caron-Duval, Édouard
Tremblay, Jacob
Fortin, Cloé
Blais, Étienne
Fan, Victor
Fortin, Daniel
Dory, Yves L.
Isomorphous crystal structures of chlorodi­acetyl­ene and iododi­acetyl­ene derivatives: simultaneous hydrogen and halogen bonds on carbon­yl
title Isomorphous crystal structures of chlorodi­acetyl­ene and iododi­acetyl­ene derivatives: simultaneous hydrogen and halogen bonds on carbon­yl
title_full Isomorphous crystal structures of chlorodi­acetyl­ene and iododi­acetyl­ene derivatives: simultaneous hydrogen and halogen bonds on carbon­yl
title_fullStr Isomorphous crystal structures of chlorodi­acetyl­ene and iododi­acetyl­ene derivatives: simultaneous hydrogen and halogen bonds on carbon­yl
title_full_unstemmed Isomorphous crystal structures of chlorodi­acetyl­ene and iododi­acetyl­ene derivatives: simultaneous hydrogen and halogen bonds on carbon­yl
title_short Isomorphous crystal structures of chlorodi­acetyl­ene and iododi­acetyl­ene derivatives: simultaneous hydrogen and halogen bonds on carbon­yl
title_sort isomorphous crystal structures of chlorodi­acetyl­ene and iododi­acetyl­ene derivatives: simultaneous hydrogen and halogen bonds on carbon­yl
topic Research Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5598843/
https://www.ncbi.nlm.nih.gov/pubmed/28932431
http://dx.doi.org/10.1107/S2056989017010155
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