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Isomorphous crystal structures of chlorodiacetylene and iododiacetylene derivatives: simultaneous hydrogen and halogen bonds on carbonyl
The crystal structures of tert-butyl (5-chloropenta-2,4-diyn-1-yl)carbamate, C(10)H(12)ClNO(2) (II), and tert-butyl (5-iodopenta-2,4-diyn-1-yl)carbamate, C(10)H(12)INO(2) (IV), are isomorphous to previously reported structures and accordingly their molecular and supramolecular structures are sim...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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International Union of Crystallography
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5598843/ https://www.ncbi.nlm.nih.gov/pubmed/28932431 http://dx.doi.org/10.1107/S2056989017010155 |
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author | Baillargeon, Pierre Rahem, Tarik Caron-Duval, Édouard Tremblay, Jacob Fortin, Cloé Blais, Étienne Fan, Victor Fortin, Daniel Dory, Yves L. |
author_facet | Baillargeon, Pierre Rahem, Tarik Caron-Duval, Édouard Tremblay, Jacob Fortin, Cloé Blais, Étienne Fan, Victor Fortin, Daniel Dory, Yves L. |
author_sort | Baillargeon, Pierre |
collection | PubMed |
description | The crystal structures of tert-butyl (5-chloropenta-2,4-diyn-1-yl)carbamate, C(10)H(12)ClNO(2) (II), and tert-butyl (5-iodopenta-2,4-diyn-1-yl)carbamate, C(10)H(12)INO(2) (IV), are isomorphous to previously reported structures and accordingly their molecular and supramolecular structures are similar. In the crystals of (II) and (IV), molecules are linked into very similar two-dimensional wall organizations with antiparallel carbamate groups involved in a combination of hydrogen and halogen bonds (bifurcated N—H⋯O=C and C≡C—X⋯O=C interactions on the same carbonyl group). There is no long-range parallel stacking of diynes, so the topochemical polymerization of diacetylene is prevented. A Cambridge Structural Database search revealed that C≡C—X⋯O=C contacts shorter than the sum of the van der Waals radii are scarce (only one structure for the C≡C—Cl⋯O=C interaction and 13 structures for the similar C≡C—I⋯O=C interaction). |
format | Online Article Text |
id | pubmed-5598843 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-55988432017-09-20 Isomorphous crystal structures of chlorodiacetylene and iododiacetylene derivatives: simultaneous hydrogen and halogen bonds on carbonyl Baillargeon, Pierre Rahem, Tarik Caron-Duval, Édouard Tremblay, Jacob Fortin, Cloé Blais, Étienne Fan, Victor Fortin, Daniel Dory, Yves L. Acta Crystallogr E Crystallogr Commun Research Communications The crystal structures of tert-butyl (5-chloropenta-2,4-diyn-1-yl)carbamate, C(10)H(12)ClNO(2) (II), and tert-butyl (5-iodopenta-2,4-diyn-1-yl)carbamate, C(10)H(12)INO(2) (IV), are isomorphous to previously reported structures and accordingly their molecular and supramolecular structures are similar. In the crystals of (II) and (IV), molecules are linked into very similar two-dimensional wall organizations with antiparallel carbamate groups involved in a combination of hydrogen and halogen bonds (bifurcated N—H⋯O=C and C≡C—X⋯O=C interactions on the same carbonyl group). There is no long-range parallel stacking of diynes, so the topochemical polymerization of diacetylene is prevented. A Cambridge Structural Database search revealed that C≡C—X⋯O=C contacts shorter than the sum of the van der Waals radii are scarce (only one structure for the C≡C—Cl⋯O=C interaction and 13 structures for the similar C≡C—I⋯O=C interaction). International Union of Crystallography 2017-07-17 /pmc/articles/PMC5598843/ /pubmed/28932431 http://dx.doi.org/10.1107/S2056989017010155 Text en © Baillargeon et al. 2017 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/2.0/uk/ |
spellingShingle | Research Communications Baillargeon, Pierre Rahem, Tarik Caron-Duval, Édouard Tremblay, Jacob Fortin, Cloé Blais, Étienne Fan, Victor Fortin, Daniel Dory, Yves L. Isomorphous crystal structures of chlorodiacetylene and iododiacetylene derivatives: simultaneous hydrogen and halogen bonds on carbonyl |
title | Isomorphous crystal structures of chlorodiacetylene and iododiacetylene derivatives: simultaneous hydrogen and halogen bonds on carbonyl |
title_full | Isomorphous crystal structures of chlorodiacetylene and iododiacetylene derivatives: simultaneous hydrogen and halogen bonds on carbonyl |
title_fullStr | Isomorphous crystal structures of chlorodiacetylene and iododiacetylene derivatives: simultaneous hydrogen and halogen bonds on carbonyl |
title_full_unstemmed | Isomorphous crystal structures of chlorodiacetylene and iododiacetylene derivatives: simultaneous hydrogen and halogen bonds on carbonyl |
title_short | Isomorphous crystal structures of chlorodiacetylene and iododiacetylene derivatives: simultaneous hydrogen and halogen bonds on carbonyl |
title_sort | isomorphous crystal structures of chlorodiacetylene and iododiacetylene derivatives: simultaneous hydrogen and halogen bonds on carbonyl |
topic | Research Communications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5598843/ https://www.ncbi.nlm.nih.gov/pubmed/28932431 http://dx.doi.org/10.1107/S2056989017010155 |
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