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Quantum chemical calculation of electron ionization mass spectra for general organic and inorganic molecules

We introduce a fully stand-alone version of the Quantum Chemistry Electron Ionization Mass Spectra (QCEIMS) program [S. Grimme, Angew. Chem. Int. Ed., 2013, 52, 6306] allowing efficient simulations for molecules composed of elements with atomic numbers up to Z = 86. The recently developed extended t...

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Autores principales: Ásgeirsson, Vilhjálmur, Bauer, Christoph A., Grimme, Stefan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Royal Society of Chemistry 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5603848/
https://www.ncbi.nlm.nih.gov/pubmed/28959412
http://dx.doi.org/10.1039/c7sc00601b
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author Ásgeirsson, Vilhjálmur
Bauer, Christoph A.
Grimme, Stefan
author_facet Ásgeirsson, Vilhjálmur
Bauer, Christoph A.
Grimme, Stefan
author_sort Ásgeirsson, Vilhjálmur
collection PubMed
description We introduce a fully stand-alone version of the Quantum Chemistry Electron Ionization Mass Spectra (QCEIMS) program [S. Grimme, Angew. Chem. Int. Ed., 2013, 52, 6306] allowing efficient simulations for molecules composed of elements with atomic numbers up to Z = 86. The recently developed extended tight-binding semi-empirical method GFN-xTB has been combined with QCEIMS, thereby eliminating dependencies on third-party electronic structure software. Furthermore, for reasonable calculations of ionization potentials, as required by the method, a second tight-binding variant, IPEA-xTB, is introduced here. This novel combination of methods allows the automatic, fast and reasonably accurate computation of electron ionization mass spectra for structurally different molecules across the periodic table. In order to validate and inspect the transferability of the method, we perform large-scale simulations for some representative organic, organometallic, and main-group inorganic systems. Theoretical spectra for 23 molecules are compared directly to experimental data taken from standard databases. For the first time, realistic quantum chemistry based EI-MS for organometallic systems like ferrocene or copper(ii)acetylacetonate are presented. Compared to previously used semiempirical methods, GFN-xTB is faster, more robust, and yields overall higher quality spectra. The partially analysed theoretical reaction and fragmentation mechanisms are chemically reasonable and reveal in unprecedented detail the extreme complexity of high energy gas phase ion chemistry including complicated rearrangement reactions prior to dissociation.
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spelling pubmed-56038482017-09-28 Quantum chemical calculation of electron ionization mass spectra for general organic and inorganic molecules Ásgeirsson, Vilhjálmur Bauer, Christoph A. Grimme, Stefan Chem Sci Chemistry We introduce a fully stand-alone version of the Quantum Chemistry Electron Ionization Mass Spectra (QCEIMS) program [S. Grimme, Angew. Chem. Int. Ed., 2013, 52, 6306] allowing efficient simulations for molecules composed of elements with atomic numbers up to Z = 86. The recently developed extended tight-binding semi-empirical method GFN-xTB has been combined with QCEIMS, thereby eliminating dependencies on third-party electronic structure software. Furthermore, for reasonable calculations of ionization potentials, as required by the method, a second tight-binding variant, IPEA-xTB, is introduced here. This novel combination of methods allows the automatic, fast and reasonably accurate computation of electron ionization mass spectra for structurally different molecules across the periodic table. In order to validate and inspect the transferability of the method, we perform large-scale simulations for some representative organic, organometallic, and main-group inorganic systems. Theoretical spectra for 23 molecules are compared directly to experimental data taken from standard databases. For the first time, realistic quantum chemistry based EI-MS for organometallic systems like ferrocene or copper(ii)acetylacetonate are presented. Compared to previously used semiempirical methods, GFN-xTB is faster, more robust, and yields overall higher quality spectra. The partially analysed theoretical reaction and fragmentation mechanisms are chemically reasonable and reveal in unprecedented detail the extreme complexity of high energy gas phase ion chemistry including complicated rearrangement reactions prior to dissociation. Royal Society of Chemistry 2017-07-01 2017-05-05 /pmc/articles/PMC5603848/ /pubmed/28959412 http://dx.doi.org/10.1039/c7sc00601b Text en This journal is © The Royal Society of Chemistry 2017 http://creativecommons.org/licenses/by/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution 3.0 Unported License (http://creativecommons.org/licenses/by/3.0/) which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Chemistry
Ásgeirsson, Vilhjálmur
Bauer, Christoph A.
Grimme, Stefan
Quantum chemical calculation of electron ionization mass spectra for general organic and inorganic molecules
title Quantum chemical calculation of electron ionization mass spectra for general organic and inorganic molecules
title_full Quantum chemical calculation of electron ionization mass spectra for general organic and inorganic molecules
title_fullStr Quantum chemical calculation of electron ionization mass spectra for general organic and inorganic molecules
title_full_unstemmed Quantum chemical calculation of electron ionization mass spectra for general organic and inorganic molecules
title_short Quantum chemical calculation of electron ionization mass spectra for general organic and inorganic molecules
title_sort quantum chemical calculation of electron ionization mass spectra for general organic and inorganic molecules
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5603848/
https://www.ncbi.nlm.nih.gov/pubmed/28959412
http://dx.doi.org/10.1039/c7sc00601b
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