Deep Sequencing Reveals a Divergent Ugandan cassava brown streak virus Isolate from Malawi

Illumina sequencing of RNA from a cassava cutting from northern Malawi produced a genome of Ugandan cassava brown streak virus (UCBSV-MW-NB7_2013). Sequence comparisons revealed stronger similarity to an isolate from nearby Tanzania (93.4% pairwise nucleotide identity) than to those previously repor...

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Detalles Bibliográficos
Autores principales: Mbewe, Willard, Winter, Stephan, Mukasa, Settumba, Tairo, Fred, Sseruwagi, Peter, Ndunguru, Joseph, Duffy, Siobain
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2017
Materias:
Viruses
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5604781/
https://www.ncbi.nlm.nih.gov/pubmed/28818908
http://dx.doi.org/10.1128/genomeA.00818-17
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author Mbewe, Willard
Winter, Stephan
Mukasa, Settumba
Tairo, Fred
Sseruwagi, Peter
Ndunguru, Joseph
Duffy, Siobain
author_facet Mbewe, Willard
Winter, Stephan
Mukasa, Settumba
Tairo, Fred
Sseruwagi, Peter
Ndunguru, Joseph
Duffy, Siobain
author_sort Mbewe, Willard
collection PubMed
description Illumina sequencing of RNA from a cassava cutting from northern Malawi produced a genome of Ugandan cassava brown streak virus (UCBSV-MW-NB7_2013). Sequence comparisons revealed stronger similarity to an isolate from nearby Tanzania (93.4% pairwise nucleotide identity) than to those previously reported from Malawi (86.9 to 87.0%).
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spelling pubmed-56047812017-09-20 Deep Sequencing Reveals a Divergent Ugandan cassava brown streak virus Isolate from Malawi Mbewe, Willard Winter, Stephan Mukasa, Settumba Tairo, Fred Sseruwagi, Peter Ndunguru, Joseph Duffy, Siobain Genome Announc Viruses Illumina sequencing of RNA from a cassava cutting from northern Malawi produced a genome of Ugandan cassava brown streak virus (UCBSV-MW-NB7_2013). Sequence comparisons revealed stronger similarity to an isolate from nearby Tanzania (93.4% pairwise nucleotide identity) than to those previously reported from Malawi (86.9 to 87.0%). American Society for Microbiology 2017-08-17 /pmc/articles/PMC5604781/ /pubmed/28818908 http://dx.doi.org/10.1128/genomeA.00818-17 Text en Copyright © 2017 Mbewe et al. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Viruses
Mbewe, Willard
Winter, Stephan
Mukasa, Settumba
Tairo, Fred
Sseruwagi, Peter
Ndunguru, Joseph
Duffy, Siobain
Deep Sequencing Reveals a Divergent Ugandan cassava brown streak virus Isolate from Malawi
title Deep Sequencing Reveals a Divergent Ugandan cassava brown streak virus Isolate from Malawi
title_full Deep Sequencing Reveals a Divergent Ugandan cassava brown streak virus Isolate from Malawi
title_fullStr Deep Sequencing Reveals a Divergent Ugandan cassava brown streak virus Isolate from Malawi
title_full_unstemmed Deep Sequencing Reveals a Divergent Ugandan cassava brown streak virus Isolate from Malawi
title_short Deep Sequencing Reveals a Divergent Ugandan cassava brown streak virus Isolate from Malawi
title_sort deep sequencing reveals a divergent ugandan cassava brown streak virus isolate from malawi
topic Viruses
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5604781/
https://www.ncbi.nlm.nih.gov/pubmed/28818908
http://dx.doi.org/10.1128/genomeA.00818-17
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