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Probing the stochastic property of endoreduplication in cell size determination of Arabidopsis thaliana leaf epidermal tissue
Cell size distribution is highly reproducible, whereas the size of individual cells often varies greatly within a tissue. This is obvious in a population of Arabidopsis thaliana leaf epidermal cells, which ranged from 1,000 to 10,000 μm(2) in size. Endoreduplication is a specialized cell cycle in wh...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5605191/ https://www.ncbi.nlm.nih.gov/pubmed/28926847 http://dx.doi.org/10.1371/journal.pone.0185050 |
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author | Kawade, Kensuke Tsukaya, Hirokazu |
author_facet | Kawade, Kensuke Tsukaya, Hirokazu |
author_sort | Kawade, Kensuke |
collection | PubMed |
description | Cell size distribution is highly reproducible, whereas the size of individual cells often varies greatly within a tissue. This is obvious in a population of Arabidopsis thaliana leaf epidermal cells, which ranged from 1,000 to 10,000 μm(2) in size. Endoreduplication is a specialized cell cycle in which nuclear genome size (ploidy) is doubled in the absence of cell division. Although epidermal cells require endoreduplication to enhance cellular expansion, the issue of whether this mechanism is sufficient for explaining cell size distribution remains unclear due to a lack of quantitative understanding linking the occurrence of endoreduplication with cell size diversity. Here, we addressed this question by quantitatively summarizing ploidy profile and cell size distribution using a simple theoretical framework. We first found that endoreduplication dynamics is a Poisson process through cellular maturation. This finding allowed us to construct a mathematical model to predict the time evolution of a ploidy profile with a single rate constant for endoreduplication occurrence in a given time. We reproduced experimentally measured ploidy profile in both wild-type leaf tissue and endoreduplication-related mutants with this analytical solution, further demonstrating the probabilistic property of endoreduplication. We next extended the mathematical model by incorporating the element that cell size is determined according to ploidy level to examine cell size distribution. This analysis revealed that cell size is exponentially enlarged 1.5 times every endoreduplication round. Because this theoretical simulation successfully recapitulated experimentally observed cell size distributions, we concluded that Poissonian endoreduplication dynamics and exponential size-boosting are the sources of the broad cell size distribution in epidermal tissue. More generally, this study contributes to a quantitative understanding whereby stochastic dynamics generate steady-state biological heterogeneity. |
format | Online Article Text |
id | pubmed-5605191 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-56051912017-09-28 Probing the stochastic property of endoreduplication in cell size determination of Arabidopsis thaliana leaf epidermal tissue Kawade, Kensuke Tsukaya, Hirokazu PLoS One Research Article Cell size distribution is highly reproducible, whereas the size of individual cells often varies greatly within a tissue. This is obvious in a population of Arabidopsis thaliana leaf epidermal cells, which ranged from 1,000 to 10,000 μm(2) in size. Endoreduplication is a specialized cell cycle in which nuclear genome size (ploidy) is doubled in the absence of cell division. Although epidermal cells require endoreduplication to enhance cellular expansion, the issue of whether this mechanism is sufficient for explaining cell size distribution remains unclear due to a lack of quantitative understanding linking the occurrence of endoreduplication with cell size diversity. Here, we addressed this question by quantitatively summarizing ploidy profile and cell size distribution using a simple theoretical framework. We first found that endoreduplication dynamics is a Poisson process through cellular maturation. This finding allowed us to construct a mathematical model to predict the time evolution of a ploidy profile with a single rate constant for endoreduplication occurrence in a given time. We reproduced experimentally measured ploidy profile in both wild-type leaf tissue and endoreduplication-related mutants with this analytical solution, further demonstrating the probabilistic property of endoreduplication. We next extended the mathematical model by incorporating the element that cell size is determined according to ploidy level to examine cell size distribution. This analysis revealed that cell size is exponentially enlarged 1.5 times every endoreduplication round. Because this theoretical simulation successfully recapitulated experimentally observed cell size distributions, we concluded that Poissonian endoreduplication dynamics and exponential size-boosting are the sources of the broad cell size distribution in epidermal tissue. More generally, this study contributes to a quantitative understanding whereby stochastic dynamics generate steady-state biological heterogeneity. Public Library of Science 2017-09-19 /pmc/articles/PMC5605191/ /pubmed/28926847 http://dx.doi.org/10.1371/journal.pone.0185050 Text en © 2017 Kawade, Tsukaya http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Kawade, Kensuke Tsukaya, Hirokazu Probing the stochastic property of endoreduplication in cell size determination of Arabidopsis thaliana leaf epidermal tissue |
title | Probing the stochastic property of endoreduplication in cell size determination of Arabidopsis thaliana leaf epidermal tissue |
title_full | Probing the stochastic property of endoreduplication in cell size determination of Arabidopsis thaliana leaf epidermal tissue |
title_fullStr | Probing the stochastic property of endoreduplication in cell size determination of Arabidopsis thaliana leaf epidermal tissue |
title_full_unstemmed | Probing the stochastic property of endoreduplication in cell size determination of Arabidopsis thaliana leaf epidermal tissue |
title_short | Probing the stochastic property of endoreduplication in cell size determination of Arabidopsis thaliana leaf epidermal tissue |
title_sort | probing the stochastic property of endoreduplication in cell size determination of arabidopsis thaliana leaf epidermal tissue |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5605191/ https://www.ncbi.nlm.nih.gov/pubmed/28926847 http://dx.doi.org/10.1371/journal.pone.0185050 |
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