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Development and field validation of a regional, management‐scale habitat model: A koala Phascolarctos cinereus case study

Species distribution models have great potential to efficiently guide management for threatened species, especially for those that are rare or cryptic. We used MaxEnt to develop a regional‐scale model for the koala Phascolarctos cinereus at a resolution (250 m) that could be used to guide management...

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Autores principales: Law, Bradley, Caccamo, Gabriele, Roe, Paul, Truskinger, Anthony, Brassil, Traecey, Gonsalves, Leroy, McConville, Anna, Stanton, Matthew
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5606888/
https://www.ncbi.nlm.nih.gov/pubmed/28944032
http://dx.doi.org/10.1002/ece3.3300
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author Law, Bradley
Caccamo, Gabriele
Roe, Paul
Truskinger, Anthony
Brassil, Traecey
Gonsalves, Leroy
McConville, Anna
Stanton, Matthew
author_facet Law, Bradley
Caccamo, Gabriele
Roe, Paul
Truskinger, Anthony
Brassil, Traecey
Gonsalves, Leroy
McConville, Anna
Stanton, Matthew
author_sort Law, Bradley
collection PubMed
description Species distribution models have great potential to efficiently guide management for threatened species, especially for those that are rare or cryptic. We used MaxEnt to develop a regional‐scale model for the koala Phascolarctos cinereus at a resolution (250 m) that could be used to guide management. To ensure the model was fit for purpose, we placed emphasis on validating the model using independently‐collected field data. We reduced substantial spatial clustering of records in coastal urban areas using a 2‐km spatial filter and by modeling separately two subregions separated by the 500‐m elevational contour. A bias file was prepared that accounted for variable survey effort. Frequency of wildfire, soil type, floristics and elevation had the highest relative contribution to the model, while a number of other variables made minor contributions. The model was effective in discriminating different habitat suitability classes when compared with koala records not used in modeling. We validated the MaxEnt model at 65 ground‐truth sites using independent data on koala occupancy (acoustic sampling) and habitat quality (browse tree availability). Koala bellows (n = 276) were analyzed in an occupancy modeling framework, while site habitat quality was indexed based on browse trees. Field validation demonstrated a linear increase in koala occupancy with higher modeled habitat suitability at ground‐truth sites. Similarly, a site habitat quality index at ground‐truth sites was correlated positively with modeled habitat suitability. The MaxEnt model provided a better fit to estimated koala occupancy than the site‐based habitat quality index, probably because many variables were considered simultaneously by the model rather than just browse species. The positive relationship of the model with both site occupancy and habitat quality indicates that the model is fit for application at relevant management scales. Field‐validated models of similar resolution would assist in guiding management of conservation‐dependent species.
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spelling pubmed-56068882017-09-24 Development and field validation of a regional, management‐scale habitat model: A koala Phascolarctos cinereus case study Law, Bradley Caccamo, Gabriele Roe, Paul Truskinger, Anthony Brassil, Traecey Gonsalves, Leroy McConville, Anna Stanton, Matthew Ecol Evol Original Research Species distribution models have great potential to efficiently guide management for threatened species, especially for those that are rare or cryptic. We used MaxEnt to develop a regional‐scale model for the koala Phascolarctos cinereus at a resolution (250 m) that could be used to guide management. To ensure the model was fit for purpose, we placed emphasis on validating the model using independently‐collected field data. We reduced substantial spatial clustering of records in coastal urban areas using a 2‐km spatial filter and by modeling separately two subregions separated by the 500‐m elevational contour. A bias file was prepared that accounted for variable survey effort. Frequency of wildfire, soil type, floristics and elevation had the highest relative contribution to the model, while a number of other variables made minor contributions. The model was effective in discriminating different habitat suitability classes when compared with koala records not used in modeling. We validated the MaxEnt model at 65 ground‐truth sites using independent data on koala occupancy (acoustic sampling) and habitat quality (browse tree availability). Koala bellows (n = 276) were analyzed in an occupancy modeling framework, while site habitat quality was indexed based on browse trees. Field validation demonstrated a linear increase in koala occupancy with higher modeled habitat suitability at ground‐truth sites. Similarly, a site habitat quality index at ground‐truth sites was correlated positively with modeled habitat suitability. The MaxEnt model provided a better fit to estimated koala occupancy than the site‐based habitat quality index, probably because many variables were considered simultaneously by the model rather than just browse species. The positive relationship of the model with both site occupancy and habitat quality indicates that the model is fit for application at relevant management scales. Field‐validated models of similar resolution would assist in guiding management of conservation‐dependent species. John Wiley and Sons Inc. 2017-08-11 /pmc/articles/PMC5606888/ /pubmed/28944032 http://dx.doi.org/10.1002/ece3.3300 Text en © 2017 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research
Law, Bradley
Caccamo, Gabriele
Roe, Paul
Truskinger, Anthony
Brassil, Traecey
Gonsalves, Leroy
McConville, Anna
Stanton, Matthew
Development and field validation of a regional, management‐scale habitat model: A koala Phascolarctos cinereus case study
title Development and field validation of a regional, management‐scale habitat model: A koala Phascolarctos cinereus case study
title_full Development and field validation of a regional, management‐scale habitat model: A koala Phascolarctos cinereus case study
title_fullStr Development and field validation of a regional, management‐scale habitat model: A koala Phascolarctos cinereus case study
title_full_unstemmed Development and field validation of a regional, management‐scale habitat model: A koala Phascolarctos cinereus case study
title_short Development and field validation of a regional, management‐scale habitat model: A koala Phascolarctos cinereus case study
title_sort development and field validation of a regional, management‐scale habitat model: a koala phascolarctos cinereus case study
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5606888/
https://www.ncbi.nlm.nih.gov/pubmed/28944032
http://dx.doi.org/10.1002/ece3.3300
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