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Desert soil clay content estimation using reflectance spectroscopy preprocessed by fractional derivative
Effective pretreatment of spectral reflectance is vital to model accuracy in soil parameter estimation. However, the classic integer derivative has some disadvantages, including spectral information loss and the introduction of high-frequency noise. In this paper, the fractional order derivative alg...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5608292/ https://www.ncbi.nlm.nih.gov/pubmed/28934274 http://dx.doi.org/10.1371/journal.pone.0184836 |
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author | Wang, Jingzhe Tiyip, Tashpolat Ding, Jianli Zhang, Dong Liu, Wei Wang, Fei Tashpolat, Nigara |
author_facet | Wang, Jingzhe Tiyip, Tashpolat Ding, Jianli Zhang, Dong Liu, Wei Wang, Fei Tashpolat, Nigara |
author_sort | Wang, Jingzhe |
collection | PubMed |
description | Effective pretreatment of spectral reflectance is vital to model accuracy in soil parameter estimation. However, the classic integer derivative has some disadvantages, including spectral information loss and the introduction of high-frequency noise. In this paper, the fractional order derivative algorithm was applied to the pretreatment and partial least squares regression (PLSR) was used to assess the clay content of desert soils. Overall, 103 soil samples were collected from the Ebinur Lake basin in the Xinjiang Uighur Autonomous Region of China, and used as data sets for calibration and validation. Following laboratory measurements of spectral reflectance and clay content, the raw spectral reflectance and absorbance data were treated using the fractional derivative order from the 0.0 to the 2.0 order (order interval: 0.2). The ratio of performance to deviation (RPD), determinant coefficients of calibration ([Image: see text] ), root mean square errors of calibration (RMSEC), determinant coefficients of prediction ([Image: see text] ), and root mean square errors of prediction (RMSEP) were applied to assess the performance of predicting models. The results showed that models built on the fractional derivative order performed better than when using the classic integer derivative. Comparison of the predictive effects of 22 models for estimating clay content, calibrated by PLSR, showed that those models based on the fractional derivative 1.8 order of spectral reflectance ([Image: see text] = 0.907, RMSEC = 0.425%, [Image: see text] = 0.916, RMSEP = 0.364%, and RPD = 2.484 ≥ 2.000) and absorbance ([Image: see text] = 0.888, RMSEC = 0.446%, [Image: see text] = 0.918, RMSEP = 0.383% and RPD = 2.511 ≥ 2.000) were most effective. Furthermore, they performed well in quantitative estimations of the clay content of soils in the study area. |
format | Online Article Text |
id | pubmed-5608292 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-56082922017-10-09 Desert soil clay content estimation using reflectance spectroscopy preprocessed by fractional derivative Wang, Jingzhe Tiyip, Tashpolat Ding, Jianli Zhang, Dong Liu, Wei Wang, Fei Tashpolat, Nigara PLoS One Research Article Effective pretreatment of spectral reflectance is vital to model accuracy in soil parameter estimation. However, the classic integer derivative has some disadvantages, including spectral information loss and the introduction of high-frequency noise. In this paper, the fractional order derivative algorithm was applied to the pretreatment and partial least squares regression (PLSR) was used to assess the clay content of desert soils. Overall, 103 soil samples were collected from the Ebinur Lake basin in the Xinjiang Uighur Autonomous Region of China, and used as data sets for calibration and validation. Following laboratory measurements of spectral reflectance and clay content, the raw spectral reflectance and absorbance data were treated using the fractional derivative order from the 0.0 to the 2.0 order (order interval: 0.2). The ratio of performance to deviation (RPD), determinant coefficients of calibration ([Image: see text] ), root mean square errors of calibration (RMSEC), determinant coefficients of prediction ([Image: see text] ), and root mean square errors of prediction (RMSEP) were applied to assess the performance of predicting models. The results showed that models built on the fractional derivative order performed better than when using the classic integer derivative. Comparison of the predictive effects of 22 models for estimating clay content, calibrated by PLSR, showed that those models based on the fractional derivative 1.8 order of spectral reflectance ([Image: see text] = 0.907, RMSEC = 0.425%, [Image: see text] = 0.916, RMSEP = 0.364%, and RPD = 2.484 ≥ 2.000) and absorbance ([Image: see text] = 0.888, RMSEC = 0.446%, [Image: see text] = 0.918, RMSEP = 0.383% and RPD = 2.511 ≥ 2.000) were most effective. Furthermore, they performed well in quantitative estimations of the clay content of soils in the study area. Public Library of Science 2017-09-21 /pmc/articles/PMC5608292/ /pubmed/28934274 http://dx.doi.org/10.1371/journal.pone.0184836 Text en © 2017 Wang et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Wang, Jingzhe Tiyip, Tashpolat Ding, Jianli Zhang, Dong Liu, Wei Wang, Fei Tashpolat, Nigara Desert soil clay content estimation using reflectance spectroscopy preprocessed by fractional derivative |
title | Desert soil clay content estimation using reflectance spectroscopy preprocessed by fractional derivative |
title_full | Desert soil clay content estimation using reflectance spectroscopy preprocessed by fractional derivative |
title_fullStr | Desert soil clay content estimation using reflectance spectroscopy preprocessed by fractional derivative |
title_full_unstemmed | Desert soil clay content estimation using reflectance spectroscopy preprocessed by fractional derivative |
title_short | Desert soil clay content estimation using reflectance spectroscopy preprocessed by fractional derivative |
title_sort | desert soil clay content estimation using reflectance spectroscopy preprocessed by fractional derivative |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5608292/ https://www.ncbi.nlm.nih.gov/pubmed/28934274 http://dx.doi.org/10.1371/journal.pone.0184836 |
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