Draft genome sequence of Dethiobacter alkaliphilus strain AHT1(T), a gram-positive sulfidogenic polyextremophile

Dethiobacter alkaliphilus strain AHT1(T) is an anaerobic, sulfidogenic, moderately salt-tolerant alkaliphilic chemolithotroph isolated from hypersaline soda lake sediments in northeastern Mongolia. It is a Gram-positive bacterium with low GC content, within the phylum Firmicutes. Here we report its...

Descripción completa

Detalles Bibliográficos
Autores principales: Melton, Emily Denise, Sorokin, Dimitry Y., Overmars, Lex, Lapidus, Alla L., Pillay, Manoj, Ivanova, Natalia, del Rio, Tijana Glavina, Kyrpides, Nikos C., Woyke, Tanja, Muyzer, Gerard
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2017
Materias:
Extended Genome Report
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5609068/
https://www.ncbi.nlm.nih.gov/pubmed/28943998
http://dx.doi.org/10.1186/s40793-017-0268-9
_version_ 1783265545500491776
author Melton, Emily Denise
Sorokin, Dimitry Y.
Overmars, Lex
Lapidus, Alla L.
Pillay, Manoj
Ivanova, Natalia
del Rio, Tijana Glavina
Kyrpides, Nikos C.
Woyke, Tanja
Muyzer, Gerard
author_facet Melton, Emily Denise
Sorokin, Dimitry Y.
Overmars, Lex
Lapidus, Alla L.
Pillay, Manoj
Ivanova, Natalia
del Rio, Tijana Glavina
Kyrpides, Nikos C.
Woyke, Tanja
Muyzer, Gerard
author_sort Melton, Emily Denise
collection PubMed
description Dethiobacter alkaliphilus strain AHT1(T) is an anaerobic, sulfidogenic, moderately salt-tolerant alkaliphilic chemolithotroph isolated from hypersaline soda lake sediments in northeastern Mongolia. It is a Gram-positive bacterium with low GC content, within the phylum Firmicutes. Here we report its draft genome sequence, which consists of 34 contigs with a total sequence length of 3.12 Mbp. D. alkaliphilus strain AHT1(T) was sequenced by the Joint Genome Institute (JGI) as part of the Community Science Program due to its relevance to bioremediation and biotechnological applications.
format Online
Article
Text
id pubmed-5609068
institution National Center for Biotechnology Information
language English
publishDate 2017
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-56090682017-09-24 Draft genome sequence of Dethiobacter alkaliphilus strain AHT1(T), a gram-positive sulfidogenic polyextremophile Melton, Emily Denise Sorokin, Dimitry Y. Overmars, Lex Lapidus, Alla L. Pillay, Manoj Ivanova, Natalia del Rio, Tijana Glavina Kyrpides, Nikos C. Woyke, Tanja Muyzer, Gerard Stand Genomic Sci Extended Genome Report Dethiobacter alkaliphilus strain AHT1(T) is an anaerobic, sulfidogenic, moderately salt-tolerant alkaliphilic chemolithotroph isolated from hypersaline soda lake sediments in northeastern Mongolia. It is a Gram-positive bacterium with low GC content, within the phylum Firmicutes. Here we report its draft genome sequence, which consists of 34 contigs with a total sequence length of 3.12 Mbp. D. alkaliphilus strain AHT1(T) was sequenced by the Joint Genome Institute (JGI) as part of the Community Science Program due to its relevance to bioremediation and biotechnological applications. BioMed Central 2017-09-21 /pmc/articles/PMC5609068/ /pubmed/28943998 http://dx.doi.org/10.1186/s40793-017-0268-9 Text en © The Author(s). 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Extended Genome Report
Melton, Emily Denise
Sorokin, Dimitry Y.
Overmars, Lex
Lapidus, Alla L.
Pillay, Manoj
Ivanova, Natalia
del Rio, Tijana Glavina
Kyrpides, Nikos C.
Woyke, Tanja
Muyzer, Gerard
Draft genome sequence of Dethiobacter alkaliphilus strain AHT1(T), a gram-positive sulfidogenic polyextremophile
title Draft genome sequence of Dethiobacter alkaliphilus strain AHT1(T), a gram-positive sulfidogenic polyextremophile
title_full Draft genome sequence of Dethiobacter alkaliphilus strain AHT1(T), a gram-positive sulfidogenic polyextremophile
title_fullStr Draft genome sequence of Dethiobacter alkaliphilus strain AHT1(T), a gram-positive sulfidogenic polyextremophile
title_full_unstemmed Draft genome sequence of Dethiobacter alkaliphilus strain AHT1(T), a gram-positive sulfidogenic polyextremophile
title_short Draft genome sequence of Dethiobacter alkaliphilus strain AHT1(T), a gram-positive sulfidogenic polyextremophile
title_sort draft genome sequence of dethiobacter alkaliphilus strain aht1(t), a gram-positive sulfidogenic polyextremophile
topic Extended Genome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5609068/
https://www.ncbi.nlm.nih.gov/pubmed/28943998
http://dx.doi.org/10.1186/s40793-017-0268-9
work_keys_str_mv AT meltonemilydenise draftgenomesequenceofdethiobacteralkaliphilusstrainaht1tagrampositivesulfidogenicpolyextremophile
AT sorokindimitryy draftgenomesequenceofdethiobacteralkaliphilusstrainaht1tagrampositivesulfidogenicpolyextremophile
AT overmarslex draftgenomesequenceofdethiobacteralkaliphilusstrainaht1tagrampositivesulfidogenicpolyextremophile
AT lapidusallal draftgenomesequenceofdethiobacteralkaliphilusstrainaht1tagrampositivesulfidogenicpolyextremophile
AT pillaymanoj draftgenomesequenceofdethiobacteralkaliphilusstrainaht1tagrampositivesulfidogenicpolyextremophile
AT ivanovanatalia draftgenomesequenceofdethiobacteralkaliphilusstrainaht1tagrampositivesulfidogenicpolyextremophile
AT delriotijanaglavina draftgenomesequenceofdethiobacteralkaliphilusstrainaht1tagrampositivesulfidogenicpolyextremophile
AT kyrpidesnikosc draftgenomesequenceofdethiobacteralkaliphilusstrainaht1tagrampositivesulfidogenicpolyextremophile
AT woyketanja draftgenomesequenceofdethiobacteralkaliphilusstrainaht1tagrampositivesulfidogenicpolyextremophile
AT muyzergerard draftgenomesequenceofdethiobacteralkaliphilusstrainaht1tagrampositivesulfidogenicpolyextremophile

Ejemplares similares