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Interactive Segmentation of Pancreases in Abdominal Computed Tomography Images and Its Evaluation Based on Segmentation Accuracy and Interaction Costs

The present paper proposed an interactive segmentation method of pancreases in abdominal computed tomography (CT) images based on the anatomical knowledge of medical doctors and the statistical information of pancreas shapes. This segmentation method consisted of two phases: training and testing. In...

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Detalles Bibliográficos
Autores principales: Takizawa, Hotaka, Suzuki, Takenobu, Kudo, Hiroyuki, Okada, Toshiyuki
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5610877/
https://www.ncbi.nlm.nih.gov/pubmed/29082247
http://dx.doi.org/10.1155/2017/5094592
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author Takizawa, Hotaka
Suzuki, Takenobu
Kudo, Hiroyuki
Okada, Toshiyuki
author_facet Takizawa, Hotaka
Suzuki, Takenobu
Kudo, Hiroyuki
Okada, Toshiyuki
author_sort Takizawa, Hotaka
collection PubMed
description The present paper proposed an interactive segmentation method of pancreases in abdominal computed tomography (CT) images based on the anatomical knowledge of medical doctors and the statistical information of pancreas shapes. This segmentation method consisted of two phases: training and testing. In the training phase, pancreas regions were manually extracted from sample CT images for training, and then a probabilistic atlas (PA) was constructed from the extracted regions. In the testing phase, a medical doctor selected seed voxels for a pancreas and background in a CT image for testing by use of our graphical user interface system. The homography transformation was used to fit the PA to the seeds. The graph cut technique whose data term was weighted by the transformed PA was applied to the test image. The seed selection, the atlas transformation, and the graph cut were executed iteratively. This doctor-in-the-loop segmentation method was applied to actual abdominal CT images of fifteen cases. The experimental results demonstrated that the proposed method was more accurate and effective than the conventional graph cut.
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spelling pubmed-56108772017-10-29 Interactive Segmentation of Pancreases in Abdominal Computed Tomography Images and Its Evaluation Based on Segmentation Accuracy and Interaction Costs Takizawa, Hotaka Suzuki, Takenobu Kudo, Hiroyuki Okada, Toshiyuki Biomed Res Int Research Article The present paper proposed an interactive segmentation method of pancreases in abdominal computed tomography (CT) images based on the anatomical knowledge of medical doctors and the statistical information of pancreas shapes. This segmentation method consisted of two phases: training and testing. In the training phase, pancreas regions were manually extracted from sample CT images for training, and then a probabilistic atlas (PA) was constructed from the extracted regions. In the testing phase, a medical doctor selected seed voxels for a pancreas and background in a CT image for testing by use of our graphical user interface system. The homography transformation was used to fit the PA to the seeds. The graph cut technique whose data term was weighted by the transformed PA was applied to the test image. The seed selection, the atlas transformation, and the graph cut were executed iteratively. This doctor-in-the-loop segmentation method was applied to actual abdominal CT images of fifteen cases. The experimental results demonstrated that the proposed method was more accurate and effective than the conventional graph cut. Hindawi 2017 2017-08-31 /pmc/articles/PMC5610877/ /pubmed/29082247 http://dx.doi.org/10.1155/2017/5094592 Text en Copyright © 2017 Hotaka Takizawa et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Takizawa, Hotaka
Suzuki, Takenobu
Kudo, Hiroyuki
Okada, Toshiyuki
Interactive Segmentation of Pancreases in Abdominal Computed Tomography Images and Its Evaluation Based on Segmentation Accuracy and Interaction Costs
title Interactive Segmentation of Pancreases in Abdominal Computed Tomography Images and Its Evaluation Based on Segmentation Accuracy and Interaction Costs
title_full Interactive Segmentation of Pancreases in Abdominal Computed Tomography Images and Its Evaluation Based on Segmentation Accuracy and Interaction Costs
title_fullStr Interactive Segmentation of Pancreases in Abdominal Computed Tomography Images and Its Evaluation Based on Segmentation Accuracy and Interaction Costs
title_full_unstemmed Interactive Segmentation of Pancreases in Abdominal Computed Tomography Images and Its Evaluation Based on Segmentation Accuracy and Interaction Costs
title_short Interactive Segmentation of Pancreases in Abdominal Computed Tomography Images and Its Evaluation Based on Segmentation Accuracy and Interaction Costs
title_sort interactive segmentation of pancreases in abdominal computed tomography images and its evaluation based on segmentation accuracy and interaction costs
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5610877/
https://www.ncbi.nlm.nih.gov/pubmed/29082247
http://dx.doi.org/10.1155/2017/5094592
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