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Neuroimaging Feature Terminology: A Controlled Terminology for the Annotation of Brain Imaging Features

Ontologies and terminologies are used for interoperability of knowledge and data in a standard manner among interdisciplinary research groups. Existing imaging ontologies capture general aspects of the imaging domain as a whole such as methodological concepts or calibrations of imaging instruments....

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Autores principales: Iyappan, Anandhi, Younesi, Erfan, Redolfi, Alberto, Vrooman, Henri, Khanna, Shashank, Frisoni, Giovanni B., Hofmann-Apitius, Martin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: IOS Press 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5611802/
https://www.ncbi.nlm.nih.gov/pubmed/28731430
http://dx.doi.org/10.3233/JAD-161148
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author Iyappan, Anandhi
Younesi, Erfan
Redolfi, Alberto
Vrooman, Henri
Khanna, Shashank
Frisoni, Giovanni B.
Hofmann-Apitius, Martin
author_facet Iyappan, Anandhi
Younesi, Erfan
Redolfi, Alberto
Vrooman, Henri
Khanna, Shashank
Frisoni, Giovanni B.
Hofmann-Apitius, Martin
author_sort Iyappan, Anandhi
collection PubMed
description Ontologies and terminologies are used for interoperability of knowledge and data in a standard manner among interdisciplinary research groups. Existing imaging ontologies capture general aspects of the imaging domain as a whole such as methodological concepts or calibrations of imaging instruments. However, none of the existing ontologies covers the diagnostic features measured by imaging technologies in the context of neurodegenerative diseases. Therefore, the Neuro-Imaging Feature Terminology (NIFT) was developed to organize the knowledge domain of measured brain features in association with neurodegenerative diseases by imaging technologies. The purpose is to identify quantitative imaging biomarkers that can be extracted from multi-modal brain imaging data. This terminology attempts to cover measured features and parameters in brain scans relevant to disease progression. In this paper, we demonstrate the systematic retrieval of measured indices from literature and how the extracted knowledge can be further used for disease modeling that integrates neuroimaging features with molecular processes.
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spelling pubmed-56118022017-10-02 Neuroimaging Feature Terminology: A Controlled Terminology for the Annotation of Brain Imaging Features Iyappan, Anandhi Younesi, Erfan Redolfi, Alberto Vrooman, Henri Khanna, Shashank Frisoni, Giovanni B. Hofmann-Apitius, Martin J Alzheimers Dis Research Article Ontologies and terminologies are used for interoperability of knowledge and data in a standard manner among interdisciplinary research groups. Existing imaging ontologies capture general aspects of the imaging domain as a whole such as methodological concepts or calibrations of imaging instruments. However, none of the existing ontologies covers the diagnostic features measured by imaging technologies in the context of neurodegenerative diseases. Therefore, the Neuro-Imaging Feature Terminology (NIFT) was developed to organize the knowledge domain of measured brain features in association with neurodegenerative diseases by imaging technologies. The purpose is to identify quantitative imaging biomarkers that can be extracted from multi-modal brain imaging data. This terminology attempts to cover measured features and parameters in brain scans relevant to disease progression. In this paper, we demonstrate the systematic retrieval of measured indices from literature and how the extracted knowledge can be further used for disease modeling that integrates neuroimaging features with molecular processes. IOS Press 2017-08-14 /pmc/articles/PMC5611802/ /pubmed/28731430 http://dx.doi.org/10.3233/JAD-161148 Text en © 2017 – IOS Press and the authors. All rights reserved https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution (CC BY 4.0) License (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Research Article
Iyappan, Anandhi
Younesi, Erfan
Redolfi, Alberto
Vrooman, Henri
Khanna, Shashank
Frisoni, Giovanni B.
Hofmann-Apitius, Martin
Neuroimaging Feature Terminology: A Controlled Terminology for the Annotation of Brain Imaging Features
title Neuroimaging Feature Terminology: A Controlled Terminology for the Annotation of Brain Imaging Features
title_full Neuroimaging Feature Terminology: A Controlled Terminology for the Annotation of Brain Imaging Features
title_fullStr Neuroimaging Feature Terminology: A Controlled Terminology for the Annotation of Brain Imaging Features
title_full_unstemmed Neuroimaging Feature Terminology: A Controlled Terminology for the Annotation of Brain Imaging Features
title_short Neuroimaging Feature Terminology: A Controlled Terminology for the Annotation of Brain Imaging Features
title_sort neuroimaging feature terminology: a controlled terminology for the annotation of brain imaging features
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5611802/
https://www.ncbi.nlm.nih.gov/pubmed/28731430
http://dx.doi.org/10.3233/JAD-161148
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