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Modeling and analysis of the Delta-Notch dependent boundary formation in the Drosophila large intestine
BACKGROUND: The boundary formation in the Drosophila large intestine is widely studied as an important biological problem. It has been shown that the Delta-Notch signaling pathway plays an essential role in the formation of boundary cells. RESULTS: In this paper, we propose a mathematical model for...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5615251/ https://www.ncbi.nlm.nih.gov/pubmed/28950873 http://dx.doi.org/10.1186/s12918-017-0455-8 |
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author | Liu, Fei Sun, Deshun Murakami, Ryutaro Matsuno, Hiroshi |
author_facet | Liu, Fei Sun, Deshun Murakami, Ryutaro Matsuno, Hiroshi |
author_sort | Liu, Fei |
collection | PubMed |
description | BACKGROUND: The boundary formation in the Drosophila large intestine is widely studied as an important biological problem. It has been shown that the Delta-Notch signaling pathway plays an essential role in the formation of boundary cells. RESULTS: In this paper, we propose a mathematical model for the Delta-Notch dependent boundary formation in the Drosophila large intestine in order to better interpret related experimental findings of this biological phenomenon. To achieve this, we not only perform stability analysis on the model from a theoretical point of view, but also perform numerical simulations to analyze the model with and without noises, the phenotype change with the change of Delta or Notch expression, and the perturbation influences of binding and inhibition parameters on the boundary formation. CONCLUSIONS: By doing all these work, we can assure that our model can better interpret the biological findings related to the boundary formation in the Drosophila large intestine. |
format | Online Article Text |
id | pubmed-5615251 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-56152512017-09-28 Modeling and analysis of the Delta-Notch dependent boundary formation in the Drosophila large intestine Liu, Fei Sun, Deshun Murakami, Ryutaro Matsuno, Hiroshi BMC Syst Biol Research BACKGROUND: The boundary formation in the Drosophila large intestine is widely studied as an important biological problem. It has been shown that the Delta-Notch signaling pathway plays an essential role in the formation of boundary cells. RESULTS: In this paper, we propose a mathematical model for the Delta-Notch dependent boundary formation in the Drosophila large intestine in order to better interpret related experimental findings of this biological phenomenon. To achieve this, we not only perform stability analysis on the model from a theoretical point of view, but also perform numerical simulations to analyze the model with and without noises, the phenotype change with the change of Delta or Notch expression, and the perturbation influences of binding and inhibition parameters on the boundary formation. CONCLUSIONS: By doing all these work, we can assure that our model can better interpret the biological findings related to the boundary formation in the Drosophila large intestine. BioMed Central 2017-09-21 /pmc/articles/PMC5615251/ /pubmed/28950873 http://dx.doi.org/10.1186/s12918-017-0455-8 Text en © The Author(s) 2017 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Liu, Fei Sun, Deshun Murakami, Ryutaro Matsuno, Hiroshi Modeling and analysis of the Delta-Notch dependent boundary formation in the Drosophila large intestine |
title | Modeling and analysis of the Delta-Notch dependent boundary formation in the Drosophila large intestine |
title_full | Modeling and analysis of the Delta-Notch dependent boundary formation in the Drosophila large intestine |
title_fullStr | Modeling and analysis of the Delta-Notch dependent boundary formation in the Drosophila large intestine |
title_full_unstemmed | Modeling and analysis of the Delta-Notch dependent boundary formation in the Drosophila large intestine |
title_short | Modeling and analysis of the Delta-Notch dependent boundary formation in the Drosophila large intestine |
title_sort | modeling and analysis of the delta-notch dependent boundary formation in the drosophila large intestine |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5615251/ https://www.ncbi.nlm.nih.gov/pubmed/28950873 http://dx.doi.org/10.1186/s12918-017-0455-8 |
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