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Docking of CDK1 with antibiotic drugs revealed novel therapeutic value in breast ductal cancer in situ
The aim of our research is to identify potential genes associated with Ductal carcinoma in situ (DCIS) through microarrays. The microarray dataset GS54665 were downloaded from the GEO(Gene Expression Omnibus) database. Dysregulated genes were screened and their associations with DCIS was analyzed by...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals LLC
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5617481/ https://www.ncbi.nlm.nih.gov/pubmed/28977921 http://dx.doi.org/10.18632/oncotarget.18779 |
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author | Ding, Zhong-Hai Qi, Jia Shang, An-Quan Zhang, Yu-Jie Wei, Jun Hu, Li-Qing Wang, Wei-Wei Yang, Man |
author_facet | Ding, Zhong-Hai Qi, Jia Shang, An-Quan Zhang, Yu-Jie Wei, Jun Hu, Li-Qing Wang, Wei-Wei Yang, Man |
author_sort | Ding, Zhong-Hai |
collection | PubMed |
description | The aim of our research is to identify potential genes associated with Ductal carcinoma in situ (DCIS) through microarrays. The microarray dataset GS54665 were downloaded from the GEO(Gene Expression Omnibus) database. Dysregulated genes were screened and their associations with DCIS was analyzed by comprehensive bioinformatics tools. A total of 649 differential expression genes were identified between normal and DCIS samples, including 224 up-regulated genes and 425 down-regulated genes. Biological process annotation and pathway enrichment analysis identified several DCIS-related signaling pathways. Finally, PPI network was constructed with String website in order to get the hub codes involved in Ductal carcinoma in situ. We thus concluded that Five genes: CDK1, CCNB2, MAD2L1, PPARG, ACACB were finally identified to participate in the regulation and serve as potential diagnosis signatures in in Ductal carcinoma in situ. Finally, complmentarity between CDK1 and three drugs, Aminophenazone, Pomalidomide and the Rosoxacin, implies novel pharmacological value of those drugs in breast cancer. |
format | Online Article Text |
id | pubmed-5617481 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Impact Journals LLC |
record_format | MEDLINE/PubMed |
spelling | pubmed-56174812017-10-03 Docking of CDK1 with antibiotic drugs revealed novel therapeutic value in breast ductal cancer in situ Ding, Zhong-Hai Qi, Jia Shang, An-Quan Zhang, Yu-Jie Wei, Jun Hu, Li-Qing Wang, Wei-Wei Yang, Man Oncotarget Research Paper The aim of our research is to identify potential genes associated with Ductal carcinoma in situ (DCIS) through microarrays. The microarray dataset GS54665 were downloaded from the GEO(Gene Expression Omnibus) database. Dysregulated genes were screened and their associations with DCIS was analyzed by comprehensive bioinformatics tools. A total of 649 differential expression genes were identified between normal and DCIS samples, including 224 up-regulated genes and 425 down-regulated genes. Biological process annotation and pathway enrichment analysis identified several DCIS-related signaling pathways. Finally, PPI network was constructed with String website in order to get the hub codes involved in Ductal carcinoma in situ. We thus concluded that Five genes: CDK1, CCNB2, MAD2L1, PPARG, ACACB were finally identified to participate in the regulation and serve as potential diagnosis signatures in in Ductal carcinoma in situ. Finally, complmentarity between CDK1 and three drugs, Aminophenazone, Pomalidomide and the Rosoxacin, implies novel pharmacological value of those drugs in breast cancer. Impact Journals LLC 2017-06-28 /pmc/articles/PMC5617481/ /pubmed/28977921 http://dx.doi.org/10.18632/oncotarget.18779 Text en Copyright: © 2017 Ding et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/) 3.0 (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Ding, Zhong-Hai Qi, Jia Shang, An-Quan Zhang, Yu-Jie Wei, Jun Hu, Li-Qing Wang, Wei-Wei Yang, Man Docking of CDK1 with antibiotic drugs revealed novel therapeutic value in breast ductal cancer in situ |
title | Docking of CDK1 with antibiotic drugs revealed novel therapeutic value in breast ductal cancer in situ |
title_full | Docking of CDK1 with antibiotic drugs revealed novel therapeutic value in breast ductal cancer in situ |
title_fullStr | Docking of CDK1 with antibiotic drugs revealed novel therapeutic value in breast ductal cancer in situ |
title_full_unstemmed | Docking of CDK1 with antibiotic drugs revealed novel therapeutic value in breast ductal cancer in situ |
title_short | Docking of CDK1 with antibiotic drugs revealed novel therapeutic value in breast ductal cancer in situ |
title_sort | docking of cdk1 with antibiotic drugs revealed novel therapeutic value in breast ductal cancer in situ |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5617481/ https://www.ncbi.nlm.nih.gov/pubmed/28977921 http://dx.doi.org/10.18632/oncotarget.18779 |
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