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Docking of CDK1 with antibiotic drugs revealed novel therapeutic value in breast ductal cancer in situ

The aim of our research is to identify potential genes associated with Ductal carcinoma in situ (DCIS) through microarrays. The microarray dataset GS54665 were downloaded from the GEO(Gene Expression Omnibus) database. Dysregulated genes were screened and their associations with DCIS was analyzed by...

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Autores principales: Ding, Zhong-Hai, Qi, Jia, Shang, An-Quan, Zhang, Yu-Jie, Wei, Jun, Hu, Li-Qing, Wang, Wei-Wei, Yang, Man
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals LLC 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5617481/
https://www.ncbi.nlm.nih.gov/pubmed/28977921
http://dx.doi.org/10.18632/oncotarget.18779
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author Ding, Zhong-Hai
Qi, Jia
Shang, An-Quan
Zhang, Yu-Jie
Wei, Jun
Hu, Li-Qing
Wang, Wei-Wei
Yang, Man
author_facet Ding, Zhong-Hai
Qi, Jia
Shang, An-Quan
Zhang, Yu-Jie
Wei, Jun
Hu, Li-Qing
Wang, Wei-Wei
Yang, Man
author_sort Ding, Zhong-Hai
collection PubMed
description The aim of our research is to identify potential genes associated with Ductal carcinoma in situ (DCIS) through microarrays. The microarray dataset GS54665 were downloaded from the GEO(Gene Expression Omnibus) database. Dysregulated genes were screened and their associations with DCIS was analyzed by comprehensive bioinformatics tools. A total of 649 differential expression genes were identified between normal and DCIS samples, including 224 up-regulated genes and 425 down-regulated genes. Biological process annotation and pathway enrichment analysis identified several DCIS-related signaling pathways. Finally, PPI network was constructed with String website in order to get the hub codes involved in Ductal carcinoma in situ. We thus concluded that Five genes: CDK1, CCNB2, MAD2L1, PPARG, ACACB were finally identified to participate in the regulation and serve as potential diagnosis signatures in in Ductal carcinoma in situ. Finally, complmentarity between CDK1 and three drugs, Aminophenazone, Pomalidomide and the Rosoxacin, implies novel pharmacological value of those drugs in breast cancer.
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spelling pubmed-56174812017-10-03 Docking of CDK1 with antibiotic drugs revealed novel therapeutic value in breast ductal cancer in situ Ding, Zhong-Hai Qi, Jia Shang, An-Quan Zhang, Yu-Jie Wei, Jun Hu, Li-Qing Wang, Wei-Wei Yang, Man Oncotarget Research Paper The aim of our research is to identify potential genes associated with Ductal carcinoma in situ (DCIS) through microarrays. The microarray dataset GS54665 were downloaded from the GEO(Gene Expression Omnibus) database. Dysregulated genes were screened and their associations with DCIS was analyzed by comprehensive bioinformatics tools. A total of 649 differential expression genes were identified between normal and DCIS samples, including 224 up-regulated genes and 425 down-regulated genes. Biological process annotation and pathway enrichment analysis identified several DCIS-related signaling pathways. Finally, PPI network was constructed with String website in order to get the hub codes involved in Ductal carcinoma in situ. We thus concluded that Five genes: CDK1, CCNB2, MAD2L1, PPARG, ACACB were finally identified to participate in the regulation and serve as potential diagnosis signatures in in Ductal carcinoma in situ. Finally, complmentarity between CDK1 and three drugs, Aminophenazone, Pomalidomide and the Rosoxacin, implies novel pharmacological value of those drugs in breast cancer. Impact Journals LLC 2017-06-28 /pmc/articles/PMC5617481/ /pubmed/28977921 http://dx.doi.org/10.18632/oncotarget.18779 Text en Copyright: © 2017 Ding et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/) 3.0 (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Ding, Zhong-Hai
Qi, Jia
Shang, An-Quan
Zhang, Yu-Jie
Wei, Jun
Hu, Li-Qing
Wang, Wei-Wei
Yang, Man
Docking of CDK1 with antibiotic drugs revealed novel therapeutic value in breast ductal cancer in situ
title Docking of CDK1 with antibiotic drugs revealed novel therapeutic value in breast ductal cancer in situ
title_full Docking of CDK1 with antibiotic drugs revealed novel therapeutic value in breast ductal cancer in situ
title_fullStr Docking of CDK1 with antibiotic drugs revealed novel therapeutic value in breast ductal cancer in situ
title_full_unstemmed Docking of CDK1 with antibiotic drugs revealed novel therapeutic value in breast ductal cancer in situ
title_short Docking of CDK1 with antibiotic drugs revealed novel therapeutic value in breast ductal cancer in situ
title_sort docking of cdk1 with antibiotic drugs revealed novel therapeutic value in breast ductal cancer in situ
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5617481/
https://www.ncbi.nlm.nih.gov/pubmed/28977921
http://dx.doi.org/10.18632/oncotarget.18779
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