Cargando…
Integrated Metabolomics Assessment of Human Dried Blood Spots and Urine Strips
(1) Background: Interest in the application of metabolomics toward clinical diagnostics development and population health monitoring has grown significantly in recent years. In spite of several advances in analytical and computational tools, obtaining a sufficient number of samples from patients rem...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5618320/ https://www.ncbi.nlm.nih.gov/pubmed/28714878 http://dx.doi.org/10.3390/metabo7030035 |
_version_ | 1783267159868178432 |
---|---|
author | Drolet, Jeremy Tolstikov, Vladimir Williams, Brian A. Greenwood, Bennett P. Hill, Collin Vishnudas, Vivek K. Sarangarajan, Rangaprasad Narain, Niven R. Kiebish, Michael A. |
author_facet | Drolet, Jeremy Tolstikov, Vladimir Williams, Brian A. Greenwood, Bennett P. Hill, Collin Vishnudas, Vivek K. Sarangarajan, Rangaprasad Narain, Niven R. Kiebish, Michael A. |
author_sort | Drolet, Jeremy |
collection | PubMed |
description | (1) Background: Interest in the application of metabolomics toward clinical diagnostics development and population health monitoring has grown significantly in recent years. In spite of several advances in analytical and computational tools, obtaining a sufficient number of samples from patients remains an obstacle. The dried blood spot (DBS) and dried urine strip (DUS) methodologies are a minimally invasive sample collection method allowing for the relative simplicity of sample collection and minimal cost. (2) Methods: In the current report, we compared results of targeted metabolomics analyses of four types of human blood sample collection methods (with and without DBS) and two types of urine sample collection (DUS and urine) across several parameters including the metabolite coverage of each matrix and the sample stability for DBS/DUS using commercially available Whatman 903TM paper. The DBS/DUS metabolomics protocols were further applied to examine the temporal metabolite level fluctuations within hours and days of sample collection. (3) Results: Several hundred polar metabolites were monitored using DBS/DUS. Temporal analysis of the polar metabolites at various times of the day and across days identified several species that fluctuate as a function of day and time. In addition, a subset of metabolites were identified to be significantly altered across hours within a day and within successive days of the week. (4) Conclusion: A comprehensive DBS/DUS metabolomics protocol was developed for human blood and urine analyses. The described methodology demonstrates the potential for enabling patients to contribute to the expanding bioanalytical demands of precision medicine and population health studies. |
format | Online Article Text |
id | pubmed-5618320 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-56183202017-09-29 Integrated Metabolomics Assessment of Human Dried Blood Spots and Urine Strips Drolet, Jeremy Tolstikov, Vladimir Williams, Brian A. Greenwood, Bennett P. Hill, Collin Vishnudas, Vivek K. Sarangarajan, Rangaprasad Narain, Niven R. Kiebish, Michael A. Metabolites Article (1) Background: Interest in the application of metabolomics toward clinical diagnostics development and population health monitoring has grown significantly in recent years. In spite of several advances in analytical and computational tools, obtaining a sufficient number of samples from patients remains an obstacle. The dried blood spot (DBS) and dried urine strip (DUS) methodologies are a minimally invasive sample collection method allowing for the relative simplicity of sample collection and minimal cost. (2) Methods: In the current report, we compared results of targeted metabolomics analyses of four types of human blood sample collection methods (with and without DBS) and two types of urine sample collection (DUS and urine) across several parameters including the metabolite coverage of each matrix and the sample stability for DBS/DUS using commercially available Whatman 903TM paper. The DBS/DUS metabolomics protocols were further applied to examine the temporal metabolite level fluctuations within hours and days of sample collection. (3) Results: Several hundred polar metabolites were monitored using DBS/DUS. Temporal analysis of the polar metabolites at various times of the day and across days identified several species that fluctuate as a function of day and time. In addition, a subset of metabolites were identified to be significantly altered across hours within a day and within successive days of the week. (4) Conclusion: A comprehensive DBS/DUS metabolomics protocol was developed for human blood and urine analyses. The described methodology demonstrates the potential for enabling patients to contribute to the expanding bioanalytical demands of precision medicine and population health studies. MDPI 2017-07-15 /pmc/articles/PMC5618320/ /pubmed/28714878 http://dx.doi.org/10.3390/metabo7030035 Text en © 2017 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Drolet, Jeremy Tolstikov, Vladimir Williams, Brian A. Greenwood, Bennett P. Hill, Collin Vishnudas, Vivek K. Sarangarajan, Rangaprasad Narain, Niven R. Kiebish, Michael A. Integrated Metabolomics Assessment of Human Dried Blood Spots and Urine Strips |
title | Integrated Metabolomics Assessment of Human Dried Blood Spots and Urine Strips |
title_full | Integrated Metabolomics Assessment of Human Dried Blood Spots and Urine Strips |
title_fullStr | Integrated Metabolomics Assessment of Human Dried Blood Spots and Urine Strips |
title_full_unstemmed | Integrated Metabolomics Assessment of Human Dried Blood Spots and Urine Strips |
title_short | Integrated Metabolomics Assessment of Human Dried Blood Spots and Urine Strips |
title_sort | integrated metabolomics assessment of human dried blood spots and urine strips |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5618320/ https://www.ncbi.nlm.nih.gov/pubmed/28714878 http://dx.doi.org/10.3390/metabo7030035 |
work_keys_str_mv | AT droletjeremy integratedmetabolomicsassessmentofhumandriedbloodspotsandurinestrips AT tolstikovvladimir integratedmetabolomicsassessmentofhumandriedbloodspotsandurinestrips AT williamsbriana integratedmetabolomicsassessmentofhumandriedbloodspotsandurinestrips AT greenwoodbennettp integratedmetabolomicsassessmentofhumandriedbloodspotsandurinestrips AT hillcollin integratedmetabolomicsassessmentofhumandriedbloodspotsandurinestrips AT vishnudasvivekk integratedmetabolomicsassessmentofhumandriedbloodspotsandurinestrips AT sarangarajanrangaprasad integratedmetabolomicsassessmentofhumandriedbloodspotsandurinestrips AT narainnivenr integratedmetabolomicsassessmentofhumandriedbloodspotsandurinestrips AT kiebishmichaela integratedmetabolomicsassessmentofhumandriedbloodspotsandurinestrips |