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Comparative Gene Mapping as a Tool to Understand the Evolution of Pest Crop Insect Chromosomes

The extent of the conservation of synteny and gene order in aphids has been previously investigated only by comparing a small subset of linkage groups between the pea aphid Acyrthosiphon pisum and a few other aphid species. Here we compared the localization of eight A. pisum scaffolds (covering more...

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Autores principales: Mandrioli, Mauro, Zambonini, Giada, Manicardi, Gian Carlo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5618568/
https://www.ncbi.nlm.nih.gov/pubmed/28880213
http://dx.doi.org/10.3390/ijms18091919
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author Mandrioli, Mauro
Zambonini, Giada
Manicardi, Gian Carlo
author_facet Mandrioli, Mauro
Zambonini, Giada
Manicardi, Gian Carlo
author_sort Mandrioli, Mauro
collection PubMed
description The extent of the conservation of synteny and gene order in aphids has been previously investigated only by comparing a small subset of linkage groups between the pea aphid Acyrthosiphon pisum and a few other aphid species. Here we compared the localization of eight A. pisum scaffolds (covering more than 5 Mb and 83 genes) in respect to the Drosophila melanogaster Muller elements identifying orthologous loci spanning all the four A. pisum chromosomes. Comparison of the genetic maps revealed a conserved synteny across different loci suggesting that the study of the fruit fly Muller elements could favour the identification of chromosomal markers useful for the study of chromosomal rearrangements in aphids. A. pisum is the first aphid species to have its genome sequenced and the finding that there are several chromosomal regions in synteny between Diptera and Hemiptera indicates that the genomic tools developed in A. pisum will be broadly useful not only for the study of other aphids but also for other insect species.
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spelling pubmed-56185682017-09-30 Comparative Gene Mapping as a Tool to Understand the Evolution of Pest Crop Insect Chromosomes Mandrioli, Mauro Zambonini, Giada Manicardi, Gian Carlo Int J Mol Sci Article The extent of the conservation of synteny and gene order in aphids has been previously investigated only by comparing a small subset of linkage groups between the pea aphid Acyrthosiphon pisum and a few other aphid species. Here we compared the localization of eight A. pisum scaffolds (covering more than 5 Mb and 83 genes) in respect to the Drosophila melanogaster Muller elements identifying orthologous loci spanning all the four A. pisum chromosomes. Comparison of the genetic maps revealed a conserved synteny across different loci suggesting that the study of the fruit fly Muller elements could favour the identification of chromosomal markers useful for the study of chromosomal rearrangements in aphids. A. pisum is the first aphid species to have its genome sequenced and the finding that there are several chromosomal regions in synteny between Diptera and Hemiptera indicates that the genomic tools developed in A. pisum will be broadly useful not only for the study of other aphids but also for other insect species. MDPI 2017-09-07 /pmc/articles/PMC5618568/ /pubmed/28880213 http://dx.doi.org/10.3390/ijms18091919 Text en © 2017 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Mandrioli, Mauro
Zambonini, Giada
Manicardi, Gian Carlo
Comparative Gene Mapping as a Tool to Understand the Evolution of Pest Crop Insect Chromosomes
title Comparative Gene Mapping as a Tool to Understand the Evolution of Pest Crop Insect Chromosomes
title_full Comparative Gene Mapping as a Tool to Understand the Evolution of Pest Crop Insect Chromosomes
title_fullStr Comparative Gene Mapping as a Tool to Understand the Evolution of Pest Crop Insect Chromosomes
title_full_unstemmed Comparative Gene Mapping as a Tool to Understand the Evolution of Pest Crop Insect Chromosomes
title_short Comparative Gene Mapping as a Tool to Understand the Evolution of Pest Crop Insect Chromosomes
title_sort comparative gene mapping as a tool to understand the evolution of pest crop insect chromosomes
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5618568/
https://www.ncbi.nlm.nih.gov/pubmed/28880213
http://dx.doi.org/10.3390/ijms18091919
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