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Comparative Gene Mapping as a Tool to Understand the Evolution of Pest Crop Insect Chromosomes
The extent of the conservation of synteny and gene order in aphids has been previously investigated only by comparing a small subset of linkage groups between the pea aphid Acyrthosiphon pisum and a few other aphid species. Here we compared the localization of eight A. pisum scaffolds (covering more...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5618568/ https://www.ncbi.nlm.nih.gov/pubmed/28880213 http://dx.doi.org/10.3390/ijms18091919 |
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author | Mandrioli, Mauro Zambonini, Giada Manicardi, Gian Carlo |
author_facet | Mandrioli, Mauro Zambonini, Giada Manicardi, Gian Carlo |
author_sort | Mandrioli, Mauro |
collection | PubMed |
description | The extent of the conservation of synteny and gene order in aphids has been previously investigated only by comparing a small subset of linkage groups between the pea aphid Acyrthosiphon pisum and a few other aphid species. Here we compared the localization of eight A. pisum scaffolds (covering more than 5 Mb and 83 genes) in respect to the Drosophila melanogaster Muller elements identifying orthologous loci spanning all the four A. pisum chromosomes. Comparison of the genetic maps revealed a conserved synteny across different loci suggesting that the study of the fruit fly Muller elements could favour the identification of chromosomal markers useful for the study of chromosomal rearrangements in aphids. A. pisum is the first aphid species to have its genome sequenced and the finding that there are several chromosomal regions in synteny between Diptera and Hemiptera indicates that the genomic tools developed in A. pisum will be broadly useful not only for the study of other aphids but also for other insect species. |
format | Online Article Text |
id | pubmed-5618568 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-56185682017-09-30 Comparative Gene Mapping as a Tool to Understand the Evolution of Pest Crop Insect Chromosomes Mandrioli, Mauro Zambonini, Giada Manicardi, Gian Carlo Int J Mol Sci Article The extent of the conservation of synteny and gene order in aphids has been previously investigated only by comparing a small subset of linkage groups between the pea aphid Acyrthosiphon pisum and a few other aphid species. Here we compared the localization of eight A. pisum scaffolds (covering more than 5 Mb and 83 genes) in respect to the Drosophila melanogaster Muller elements identifying orthologous loci spanning all the four A. pisum chromosomes. Comparison of the genetic maps revealed a conserved synteny across different loci suggesting that the study of the fruit fly Muller elements could favour the identification of chromosomal markers useful for the study of chromosomal rearrangements in aphids. A. pisum is the first aphid species to have its genome sequenced and the finding that there are several chromosomal regions in synteny between Diptera and Hemiptera indicates that the genomic tools developed in A. pisum will be broadly useful not only for the study of other aphids but also for other insect species. MDPI 2017-09-07 /pmc/articles/PMC5618568/ /pubmed/28880213 http://dx.doi.org/10.3390/ijms18091919 Text en © 2017 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Mandrioli, Mauro Zambonini, Giada Manicardi, Gian Carlo Comparative Gene Mapping as a Tool to Understand the Evolution of Pest Crop Insect Chromosomes |
title | Comparative Gene Mapping as a Tool to Understand the Evolution of Pest Crop Insect Chromosomes |
title_full | Comparative Gene Mapping as a Tool to Understand the Evolution of Pest Crop Insect Chromosomes |
title_fullStr | Comparative Gene Mapping as a Tool to Understand the Evolution of Pest Crop Insect Chromosomes |
title_full_unstemmed | Comparative Gene Mapping as a Tool to Understand the Evolution of Pest Crop Insect Chromosomes |
title_short | Comparative Gene Mapping as a Tool to Understand the Evolution of Pest Crop Insect Chromosomes |
title_sort | comparative gene mapping as a tool to understand the evolution of pest crop insect chromosomes |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5618568/ https://www.ncbi.nlm.nih.gov/pubmed/28880213 http://dx.doi.org/10.3390/ijms18091919 |
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