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Why Ubiquitin Has Not Evolved

Ubiquitin, discovered less than 50 years ago, tags thousands of diseased proteins for destruction. It is small (only 76 amino acids), and is found unchanged in mammals, birds, fish, and even worms, indicating that ubiquitin is perfect. Key features of its functionality are identified here using crit...

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Detalles Bibliográficos
Autores principales: Allan, Douglas C., Phillips, James C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5618644/
https://www.ncbi.nlm.nih.gov/pubmed/28926941
http://dx.doi.org/10.3390/ijms18091995
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author Allan, Douglas C.
Phillips, James C.
author_facet Allan, Douglas C.
Phillips, James C.
author_sort Allan, Douglas C.
collection PubMed
description Ubiquitin, discovered less than 50 years ago, tags thousands of diseased proteins for destruction. It is small (only 76 amino acids), and is found unchanged in mammals, birds, fish, and even worms, indicating that ubiquitin is perfect. Key features of its functionality are identified here using critical point thermodynamic scaling theory. These include synchronized pivots and hinges, a stabilizing central pivot, and Fano interference between first- and second-order elements of correlated long-range (allosteric) globular surface shape transitions. Comparison with its closest relative, 76 amino acid Nedd8, shows that the latter lacks all these features. A cracked elastic network model is proposed for the common target shared by many diseased proteins.
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spelling pubmed-56186442017-09-30 Why Ubiquitin Has Not Evolved Allan, Douglas C. Phillips, James C. Int J Mol Sci Article Ubiquitin, discovered less than 50 years ago, tags thousands of diseased proteins for destruction. It is small (only 76 amino acids), and is found unchanged in mammals, birds, fish, and even worms, indicating that ubiquitin is perfect. Key features of its functionality are identified here using critical point thermodynamic scaling theory. These include synchronized pivots and hinges, a stabilizing central pivot, and Fano interference between first- and second-order elements of correlated long-range (allosteric) globular surface shape transitions. Comparison with its closest relative, 76 amino acid Nedd8, shows that the latter lacks all these features. A cracked elastic network model is proposed for the common target shared by many diseased proteins. MDPI 2017-09-16 /pmc/articles/PMC5618644/ /pubmed/28926941 http://dx.doi.org/10.3390/ijms18091995 Text en © 2017 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Allan, Douglas C.
Phillips, James C.
Why Ubiquitin Has Not Evolved
title Why Ubiquitin Has Not Evolved
title_full Why Ubiquitin Has Not Evolved
title_fullStr Why Ubiquitin Has Not Evolved
title_full_unstemmed Why Ubiquitin Has Not Evolved
title_short Why Ubiquitin Has Not Evolved
title_sort why ubiquitin has not evolved
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5618644/
https://www.ncbi.nlm.nih.gov/pubmed/28926941
http://dx.doi.org/10.3390/ijms18091995
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