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EUF1 – a newly identified gene involved in erythritol utilization in Yarrowia lipolytica

The gene YALI0F01562g was identified as an important factor involved in erythritol catabolism of the unconventional yeast Yarrowia lipolytica. Its putative role was identified for the first time by comparative analysis of four Y. lipolytica strains: A-101.1.31, Wratislavia K1, MK1 and AMM. The prese...

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Autores principales: Rzechonek, Dorota A., Neuvéglise, Cécile, Devillers, Hugo, Rymowicz, Waldemar, Mirończuk, Aleksandra M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5624910/
https://www.ncbi.nlm.nih.gov/pubmed/28970528
http://dx.doi.org/10.1038/s41598-017-12715-7
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author Rzechonek, Dorota A.
Neuvéglise, Cécile
Devillers, Hugo
Rymowicz, Waldemar
Mirończuk, Aleksandra M.
author_facet Rzechonek, Dorota A.
Neuvéglise, Cécile
Devillers, Hugo
Rymowicz, Waldemar
Mirończuk, Aleksandra M.
author_sort Rzechonek, Dorota A.
collection PubMed
description The gene YALI0F01562g was identified as an important factor involved in erythritol catabolism of the unconventional yeast Yarrowia lipolytica. Its putative role was identified for the first time by comparative analysis of four Y. lipolytica strains: A-101.1.31, Wratislavia K1, MK1 and AMM. The presence of a mutation that seriously damaged the gene corresponded to inability of the strain Wratislavia K1 to utilize erythritol. RT-PCR analysis of the strain MK1 demonstrated a significant increase in YALI0F01562g expression during growth on erythritol. Further studies involving deletion and overexpression of the selected gene showed that it is indeed essential for efficient erythritol assimilation. The deletion strain Y. lipolytica AMM∆euf1 was almost unable to grow on erythritol as the sole carbon source. When the strain was applied in the process of erythritol production from glycerol, the amount of erythritol remained constant after reaching the maximal concentration. Analysis of the YALI0F01562g gene sequence revealed the presence of domains characteristic for transcription factors. Therefore we suggest naming the studied gene Erythritol Utilization Factor – EUF1.
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spelling pubmed-56249102017-10-12 EUF1 – a newly identified gene involved in erythritol utilization in Yarrowia lipolytica Rzechonek, Dorota A. Neuvéglise, Cécile Devillers, Hugo Rymowicz, Waldemar Mirończuk, Aleksandra M. Sci Rep Article The gene YALI0F01562g was identified as an important factor involved in erythritol catabolism of the unconventional yeast Yarrowia lipolytica. Its putative role was identified for the first time by comparative analysis of four Y. lipolytica strains: A-101.1.31, Wratislavia K1, MK1 and AMM. The presence of a mutation that seriously damaged the gene corresponded to inability of the strain Wratislavia K1 to utilize erythritol. RT-PCR analysis of the strain MK1 demonstrated a significant increase in YALI0F01562g expression during growth on erythritol. Further studies involving deletion and overexpression of the selected gene showed that it is indeed essential for efficient erythritol assimilation. The deletion strain Y. lipolytica AMM∆euf1 was almost unable to grow on erythritol as the sole carbon source. When the strain was applied in the process of erythritol production from glycerol, the amount of erythritol remained constant after reaching the maximal concentration. Analysis of the YALI0F01562g gene sequence revealed the presence of domains characteristic for transcription factors. Therefore we suggest naming the studied gene Erythritol Utilization Factor – EUF1. Nature Publishing Group UK 2017-10-02 /pmc/articles/PMC5624910/ /pubmed/28970528 http://dx.doi.org/10.1038/s41598-017-12715-7 Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Rzechonek, Dorota A.
Neuvéglise, Cécile
Devillers, Hugo
Rymowicz, Waldemar
Mirończuk, Aleksandra M.
EUF1 – a newly identified gene involved in erythritol utilization in Yarrowia lipolytica
title EUF1 – a newly identified gene involved in erythritol utilization in Yarrowia lipolytica
title_full EUF1 – a newly identified gene involved in erythritol utilization in Yarrowia lipolytica
title_fullStr EUF1 – a newly identified gene involved in erythritol utilization in Yarrowia lipolytica
title_full_unstemmed EUF1 – a newly identified gene involved in erythritol utilization in Yarrowia lipolytica
title_short EUF1 – a newly identified gene involved in erythritol utilization in Yarrowia lipolytica
title_sort euf1 – a newly identified gene involved in erythritol utilization in yarrowia lipolytica
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5624910/
https://www.ncbi.nlm.nih.gov/pubmed/28970528
http://dx.doi.org/10.1038/s41598-017-12715-7
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