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Association between regulator of telomere elongation helicase1 (RTEL1) gene and HAPE risk: A case-control study
High altitude pulmonary edema (HAPE) is a paradigm of pulmonary edema. Mutations in regulator of telomere elongation helicase1 (RTEL1) represent an important contributor to risk for pulmonary fibrosis. However, little information is found about the association between RTEL1 and HAPE risk. The presen...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Wolters Kluwer Health
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5626330/ https://www.ncbi.nlm.nih.gov/pubmed/28953687 http://dx.doi.org/10.1097/MD.0000000000008222 |
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author | Rong, Hao He, Xue Zhu, Linhao Zhu, Xikai Kang, Longli Wang, Li He, Yongjun Yuan, Dongya Jin, Tianbo |
author_facet | Rong, Hao He, Xue Zhu, Linhao Zhu, Xikai Kang, Longli Wang, Li He, Yongjun Yuan, Dongya Jin, Tianbo |
author_sort | Rong, Hao |
collection | PubMed |
description | High altitude pulmonary edema (HAPE) is a paradigm of pulmonary edema. Mutations in regulator of telomere elongation helicase1 (RTEL1) represent an important contributor to risk for pulmonary fibrosis. However, little information is found about the association between RTEL1 and HAPE risk. The present study was undertaken to tentatively explore the potential relation between single-nucleotide polymorphisms (SNPs) in RTEL1 and HAPE risk in Chinese Han population. A total of 265 HAPE patients and 303 healthy controls were included in our case-control study. Four SNPs in RTEL1 were selected and genotyped using the Sequenom MassARRAY method. Odds ratios (ORs) and 95% confidence intervals (95% CIs) were calculated by unconditional logistic regression with adjustment for gender and age. All P values were Bonferroni corrected, and statistical significance was set at P < .0025 (.05/20). In allelic model analysis, we found that the allele “G” of rs6089953 and rs6010621 and the allele “A” of rs2297441 were associated with decreased risk of HAPE. In the genetic model analysis, we found that rs6010621, rs6089953, and rs2297441 were relevant to decreased HAPE risk under dominant model (rs6010621: OR = 0.55; 95% CI = 0.39–0.78; P = .001; rs6089953: OR = 0.68; 95% CI = 0.48–0.96; P = .027; rs2297441: OR = 0.63; 95% CI = 0.45–0.89; P = .008, respectively) and additive model (rs6010621: OR = 0.51; 95% CI = 0.46–0.81; P < .001; rs6089953: OR = 0.72; 95% CI = 0.55–0.95; P = .022; rs2297441: OR = 0.73; 95% CI = 0.57–0.95; P = .019, respectively). SNPs rs6010621 remained significant after Bonferroni correction (P < .0025). In addition, haplotype “GG, GT, AT” of rs6089953-rs6010621 were detected significantly associated with HAPE risk (P < .05), haplotype “GG” remained significant after Bonferroni correction (P < .0025). Our findings provide new evidence for the association between SNPs in RTEL1 and a decreased risk HAPE in the Chinese population. The results need further confirmation. |
format | Online Article Text |
id | pubmed-5626330 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Wolters Kluwer Health |
record_format | MEDLINE/PubMed |
spelling | pubmed-56263302017-10-11 Association between regulator of telomere elongation helicase1 (RTEL1) gene and HAPE risk: A case-control study Rong, Hao He, Xue Zhu, Linhao Zhu, Xikai Kang, Longli Wang, Li He, Yongjun Yuan, Dongya Jin, Tianbo Medicine (Baltimore) 3500 High altitude pulmonary edema (HAPE) is a paradigm of pulmonary edema. Mutations in regulator of telomere elongation helicase1 (RTEL1) represent an important contributor to risk for pulmonary fibrosis. However, little information is found about the association between RTEL1 and HAPE risk. The present study was undertaken to tentatively explore the potential relation between single-nucleotide polymorphisms (SNPs) in RTEL1 and HAPE risk in Chinese Han population. A total of 265 HAPE patients and 303 healthy controls were included in our case-control study. Four SNPs in RTEL1 were selected and genotyped using the Sequenom MassARRAY method. Odds ratios (ORs) and 95% confidence intervals (95% CIs) were calculated by unconditional logistic regression with adjustment for gender and age. All P values were Bonferroni corrected, and statistical significance was set at P < .0025 (.05/20). In allelic model analysis, we found that the allele “G” of rs6089953 and rs6010621 and the allele “A” of rs2297441 were associated with decreased risk of HAPE. In the genetic model analysis, we found that rs6010621, rs6089953, and rs2297441 were relevant to decreased HAPE risk under dominant model (rs6010621: OR = 0.55; 95% CI = 0.39–0.78; P = .001; rs6089953: OR = 0.68; 95% CI = 0.48–0.96; P = .027; rs2297441: OR = 0.63; 95% CI = 0.45–0.89; P = .008, respectively) and additive model (rs6010621: OR = 0.51; 95% CI = 0.46–0.81; P < .001; rs6089953: OR = 0.72; 95% CI = 0.55–0.95; P = .022; rs2297441: OR = 0.73; 95% CI = 0.57–0.95; P = .019, respectively). SNPs rs6010621 remained significant after Bonferroni correction (P < .0025). In addition, haplotype “GG, GT, AT” of rs6089953-rs6010621 were detected significantly associated with HAPE risk (P < .05), haplotype “GG” remained significant after Bonferroni correction (P < .0025). Our findings provide new evidence for the association between SNPs in RTEL1 and a decreased risk HAPE in the Chinese population. The results need further confirmation. Wolters Kluwer Health 2017-09-29 /pmc/articles/PMC5626330/ /pubmed/28953687 http://dx.doi.org/10.1097/MD.0000000000008222 Text en Copyright © 2017 the Author(s). Published by Wolters Kluwer Health, Inc. http://creativecommons.org/licenses/by-nc-nd/4.0 This is an open access article distributed under the terms of the Creative Commons Attribution-Non Commercial-No Derivatives License 4.0 (CCBY-NC-ND), where it is permissible to download and share the work provided it is properly cited. The work cannot be changed in any way or used commercially without permission from the journal. http://creativecommons.org/licenses/by-nc-nd/4.0 |
spellingShingle | 3500 Rong, Hao He, Xue Zhu, Linhao Zhu, Xikai Kang, Longli Wang, Li He, Yongjun Yuan, Dongya Jin, Tianbo Association between regulator of telomere elongation helicase1 (RTEL1) gene and HAPE risk: A case-control study |
title | Association between regulator of telomere elongation helicase1 (RTEL1) gene and HAPE risk: A case-control study |
title_full | Association between regulator of telomere elongation helicase1 (RTEL1) gene and HAPE risk: A case-control study |
title_fullStr | Association between regulator of telomere elongation helicase1 (RTEL1) gene and HAPE risk: A case-control study |
title_full_unstemmed | Association between regulator of telomere elongation helicase1 (RTEL1) gene and HAPE risk: A case-control study |
title_short | Association between regulator of telomere elongation helicase1 (RTEL1) gene and HAPE risk: A case-control study |
title_sort | association between regulator of telomere elongation helicase1 (rtel1) gene and hape risk: a case-control study |
topic | 3500 |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5626330/ https://www.ncbi.nlm.nih.gov/pubmed/28953687 http://dx.doi.org/10.1097/MD.0000000000008222 |
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