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A generic method for improving the spatial interoperability of medical and ecological databases

BACKGROUND: The availability of big data in healthcare and the intensive development of data reuse and georeferencing have opened up perspectives for health spatial analysis. However, fine-scale spatial studies of ecological and medical databases are limited by the change of support problem and thus...

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Autores principales: Ghenassia, A., Beuscart, J. B., Ficheur, G., Occelli, F., Babykina, E., Chazard, E., Genin, M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5627422/
https://www.ncbi.nlm.nih.gov/pubmed/28974262
http://dx.doi.org/10.1186/s12942-017-0109-5
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author Ghenassia, A.
Beuscart, J. B.
Ficheur, G.
Occelli, F.
Babykina, E.
Chazard, E.
Genin, M.
author_facet Ghenassia, A.
Beuscart, J. B.
Ficheur, G.
Occelli, F.
Babykina, E.
Chazard, E.
Genin, M.
author_sort Ghenassia, A.
collection PubMed
description BACKGROUND: The availability of big data in healthcare and the intensive development of data reuse and georeferencing have opened up perspectives for health spatial analysis. However, fine-scale spatial studies of ecological and medical databases are limited by the change of support problem and thus a lack of spatial unit interoperability. The use of spatial disaggregation methods to solve this problem introduces errors into the spatial estimations. Here, we present a generic, two-step method for merging medical and ecological databases that avoids the use of spatial disaggregation methods, while maximizing the spatial resolution. METHODS: Firstly, a mapping table is created after one or more transition matrices have been defined. The latter link the spatial units of the original databases to the spatial units of the final database. Secondly, the mapping table is validated by (1) comparing the covariates contained in the two original databases, and (2) checking the spatial validity with a spatial continuity criterion and a spatial resolution index. RESULTS: We used our novel method to merge a medical database (the French national diagnosis-related group database, containing 5644 spatial units) with an ecological database (produced by the French National Institute of Statistics and Economic Studies, and containing with 36,594 spatial units). The mapping table yielded 5632 final spatial units. The mapping table’s validity was evaluated by comparing the number of births in the medical database and the ecological databases in each final spatial unit. The median [interquartile range] relative difference was 2.3% [0; 5.7]. The spatial continuity criterion was low (2.4%), and the spatial resolution index was greater than for most French administrative areas. CONCLUSIONS: Our innovative approach improves interoperability between medical and ecological databases and facilitates fine-scale spatial analyses. We have shown that disaggregation models and large aggregation techniques are not necessarily the best ways to tackle the change of support problem. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12942-017-0109-5) contains supplementary material, which is available to authorized users.
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spelling pubmed-56274222017-10-12 A generic method for improving the spatial interoperability of medical and ecological databases Ghenassia, A. Beuscart, J. B. Ficheur, G. Occelli, F. Babykina, E. Chazard, E. Genin, M. Int J Health Geogr Methodology BACKGROUND: The availability of big data in healthcare and the intensive development of data reuse and georeferencing have opened up perspectives for health spatial analysis. However, fine-scale spatial studies of ecological and medical databases are limited by the change of support problem and thus a lack of spatial unit interoperability. The use of spatial disaggregation methods to solve this problem introduces errors into the spatial estimations. Here, we present a generic, two-step method for merging medical and ecological databases that avoids the use of spatial disaggregation methods, while maximizing the spatial resolution. METHODS: Firstly, a mapping table is created after one or more transition matrices have been defined. The latter link the spatial units of the original databases to the spatial units of the final database. Secondly, the mapping table is validated by (1) comparing the covariates contained in the two original databases, and (2) checking the spatial validity with a spatial continuity criterion and a spatial resolution index. RESULTS: We used our novel method to merge a medical database (the French national diagnosis-related group database, containing 5644 spatial units) with an ecological database (produced by the French National Institute of Statistics and Economic Studies, and containing with 36,594 spatial units). The mapping table yielded 5632 final spatial units. The mapping table’s validity was evaluated by comparing the number of births in the medical database and the ecological databases in each final spatial unit. The median [interquartile range] relative difference was 2.3% [0; 5.7]. The spatial continuity criterion was low (2.4%), and the spatial resolution index was greater than for most French administrative areas. CONCLUSIONS: Our innovative approach improves interoperability between medical and ecological databases and facilitates fine-scale spatial analyses. We have shown that disaggregation models and large aggregation techniques are not necessarily the best ways to tackle the change of support problem. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12942-017-0109-5) contains supplementary material, which is available to authorized users. BioMed Central 2017-10-03 /pmc/articles/PMC5627422/ /pubmed/28974262 http://dx.doi.org/10.1186/s12942-017-0109-5 Text en © The Author(s) 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Methodology
Ghenassia, A.
Beuscart, J. B.
Ficheur, G.
Occelli, F.
Babykina, E.
Chazard, E.
Genin, M.
A generic method for improving the spatial interoperability of medical and ecological databases
title A generic method for improving the spatial interoperability of medical and ecological databases
title_full A generic method for improving the spatial interoperability of medical and ecological databases
title_fullStr A generic method for improving the spatial interoperability of medical and ecological databases
title_full_unstemmed A generic method for improving the spatial interoperability of medical and ecological databases
title_short A generic method for improving the spatial interoperability of medical and ecological databases
title_sort generic method for improving the spatial interoperability of medical and ecological databases
topic Methodology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5627422/
https://www.ncbi.nlm.nih.gov/pubmed/28974262
http://dx.doi.org/10.1186/s12942-017-0109-5
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