Draft genome sequence of Streptomyces sp. strain F1, a potential source for glycoside hydrolases isolated from Brazilian soil

Here, we show the draft genome sequence of Streptomyces sp. F1, a strain isolated from soil with great potential for secretion of hydrolytic enzymes used to deconstruct cellulosic biomass. The draft genome assembly of Streptomyces sp. strain F1 has 69 contigs with a total genome size of 8,142,296 bp...

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Detalles Bibliográficos
Autores principales: Melo, Ricardo Rodrigues de, Persinoti, Gabriela Felix, Paixão, Douglas Antonio Alvaredo, Squina, Fábio Márcio, Ruller, Roberto, Sato, Helia Harumi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2017
Materias:
Genome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5628315/
https://www.ncbi.nlm.nih.gov/pubmed/28359855
http://dx.doi.org/10.1016/j.bjm.2016.11.010
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author Melo, Ricardo Rodrigues de
Persinoti, Gabriela Felix
Paixão, Douglas Antonio Alvaredo
Squina, Fábio Márcio
Ruller, Roberto
Sato, Helia Harumi
author_facet Melo, Ricardo Rodrigues de
Persinoti, Gabriela Felix
Paixão, Douglas Antonio Alvaredo
Squina, Fábio Márcio
Ruller, Roberto
Sato, Helia Harumi
author_sort Melo, Ricardo Rodrigues de
collection PubMed
description Here, we show the draft genome sequence of Streptomyces sp. F1, a strain isolated from soil with great potential for secretion of hydrolytic enzymes used to deconstruct cellulosic biomass. The draft genome assembly of Streptomyces sp. strain F1 has 69 contigs with a total genome size of 8,142,296 bp and G + C 72.65%. Preliminary genome analysis identified 175 proteins as Carbohydrate-Active Enzymes, being 85 glycoside hydrolases organized in 33 distinct families. This draft genome information provides new insights on the key genes encoding hydrolytic enzymes involved in biomass deconstruction employed by soil bacteria.
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spelling pubmed-56283152017-10-10 Draft genome sequence of Streptomyces sp. strain F1, a potential source for glycoside hydrolases isolated from Brazilian soil Melo, Ricardo Rodrigues de Persinoti, Gabriela Felix Paixão, Douglas Antonio Alvaredo Squina, Fábio Márcio Ruller, Roberto Sato, Helia Harumi Braz J Microbiol Genome Announcement Here, we show the draft genome sequence of Streptomyces sp. F1, a strain isolated from soil with great potential for secretion of hydrolytic enzymes used to deconstruct cellulosic biomass. The draft genome assembly of Streptomyces sp. strain F1 has 69 contigs with a total genome size of 8,142,296 bp and G + C 72.65%. Preliminary genome analysis identified 175 proteins as Carbohydrate-Active Enzymes, being 85 glycoside hydrolases organized in 33 distinct families. This draft genome information provides new insights on the key genes encoding hydrolytic enzymes involved in biomass deconstruction employed by soil bacteria. Elsevier 2017-02-10 /pmc/articles/PMC5628315/ /pubmed/28359855 http://dx.doi.org/10.1016/j.bjm.2016.11.010 Text en © 2017 Sociedade Brasileira de Microbiologia. Published by Elsevier Editora Ltda. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Genome Announcement
Melo, Ricardo Rodrigues de
Persinoti, Gabriela Felix
Paixão, Douglas Antonio Alvaredo
Squina, Fábio Márcio
Ruller, Roberto
Sato, Helia Harumi
Draft genome sequence of Streptomyces sp. strain F1, a potential source for glycoside hydrolases isolated from Brazilian soil
title Draft genome sequence of Streptomyces sp. strain F1, a potential source for glycoside hydrolases isolated from Brazilian soil
title_full Draft genome sequence of Streptomyces sp. strain F1, a potential source for glycoside hydrolases isolated from Brazilian soil
title_fullStr Draft genome sequence of Streptomyces sp. strain F1, a potential source for glycoside hydrolases isolated from Brazilian soil
title_full_unstemmed Draft genome sequence of Streptomyces sp. strain F1, a potential source for glycoside hydrolases isolated from Brazilian soil
title_short Draft genome sequence of Streptomyces sp. strain F1, a potential source for glycoside hydrolases isolated from Brazilian soil
title_sort draft genome sequence of streptomyces sp. strain f1, a potential source for glycoside hydrolases isolated from brazilian soil
topic Genome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5628315/
https://www.ncbi.nlm.nih.gov/pubmed/28359855
http://dx.doi.org/10.1016/j.bjm.2016.11.010
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