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Draft genome sequence of Bradyrhizobium manausense strain BR 3351(T), an effective symbiont isolated from Amazon rainforest
The strain BR 3351(T) (Bradyrhizobium manausense) was obtained from nodules of cowpea (Vigna unguiculata L. Walp) growing in soil collected from Amazon rainforest. Furthermore, it was observed that the strain has high capacity to fix nitrogen symbiotically in symbioses with cowpea. We report here th...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5628366/ https://www.ncbi.nlm.nih.gov/pubmed/28237675 http://dx.doi.org/10.1016/j.bjm.2016.10.025 |
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author | Simões-Araújo, Jean Luiz Rumjanek, Norma Gouvêa Xavier, Gustavo Ribeiro Zilli, Jerri Édson |
author_facet | Simões-Araújo, Jean Luiz Rumjanek, Norma Gouvêa Xavier, Gustavo Ribeiro Zilli, Jerri Édson |
author_sort | Simões-Araújo, Jean Luiz |
collection | PubMed |
description | The strain BR 3351(T) (Bradyrhizobium manausense) was obtained from nodules of cowpea (Vigna unguiculata L. Walp) growing in soil collected from Amazon rainforest. Furthermore, it was observed that the strain has high capacity to fix nitrogen symbiotically in symbioses with cowpea. We report here the draft genome sequence of strain BR 3351(T). The information presented will be important for comparative analysis of nodulation and nitrogen fixation for diazotrophic bacteria. A draft genome with 9,145,311 bp and 62.9% of GC content was assembled in 127 scaffolds using 100 bp pair-end Illumina MiSeq system. The RAST annotation identified 8603 coding sequences, 51 RNAs genes, classified in 504 subsystems. |
format | Online Article Text |
id | pubmed-5628366 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-56283662017-10-10 Draft genome sequence of Bradyrhizobium manausense strain BR 3351(T), an effective symbiont isolated from Amazon rainforest Simões-Araújo, Jean Luiz Rumjanek, Norma Gouvêa Xavier, Gustavo Ribeiro Zilli, Jerri Édson Braz J Microbiol Genome Announcement The strain BR 3351(T) (Bradyrhizobium manausense) was obtained from nodules of cowpea (Vigna unguiculata L. Walp) growing in soil collected from Amazon rainforest. Furthermore, it was observed that the strain has high capacity to fix nitrogen symbiotically in symbioses with cowpea. We report here the draft genome sequence of strain BR 3351(T). The information presented will be important for comparative analysis of nodulation and nitrogen fixation for diazotrophic bacteria. A draft genome with 9,145,311 bp and 62.9% of GC content was assembled in 127 scaffolds using 100 bp pair-end Illumina MiSeq system. The RAST annotation identified 8603 coding sequences, 51 RNAs genes, classified in 504 subsystems. Elsevier 2017-02-09 /pmc/articles/PMC5628366/ /pubmed/28237675 http://dx.doi.org/10.1016/j.bjm.2016.10.025 Text en http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Genome Announcement Simões-Araújo, Jean Luiz Rumjanek, Norma Gouvêa Xavier, Gustavo Ribeiro Zilli, Jerri Édson Draft genome sequence of Bradyrhizobium manausense strain BR 3351(T), an effective symbiont isolated from Amazon rainforest |
title | Draft genome sequence of Bradyrhizobium manausense strain BR 3351(T), an effective symbiont isolated from Amazon rainforest |
title_full | Draft genome sequence of Bradyrhizobium manausense strain BR 3351(T), an effective symbiont isolated from Amazon rainforest |
title_fullStr | Draft genome sequence of Bradyrhizobium manausense strain BR 3351(T), an effective symbiont isolated from Amazon rainforest |
title_full_unstemmed | Draft genome sequence of Bradyrhizobium manausense strain BR 3351(T), an effective symbiont isolated from Amazon rainforest |
title_short | Draft genome sequence of Bradyrhizobium manausense strain BR 3351(T), an effective symbiont isolated from Amazon rainforest |
title_sort | draft genome sequence of bradyrhizobium manausense strain br 3351(t), an effective symbiont isolated from amazon rainforest |
topic | Genome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5628366/ https://www.ncbi.nlm.nih.gov/pubmed/28237675 http://dx.doi.org/10.1016/j.bjm.2016.10.025 |
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