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Draft genome sequence of Bradyrhizobium manausense strain BR 3351(T), an effective symbiont isolated from Amazon rainforest

The strain BR 3351(T) (Bradyrhizobium manausense) was obtained from nodules of cowpea (Vigna unguiculata L. Walp) growing in soil collected from Amazon rainforest. Furthermore, it was observed that the strain has high capacity to fix nitrogen symbiotically in symbioses with cowpea. We report here th...

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Detalles Bibliográficos
Autores principales: Simões-Araújo, Jean Luiz, Rumjanek, Norma Gouvêa, Xavier, Gustavo Ribeiro, Zilli, Jerri Édson
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5628366/
https://www.ncbi.nlm.nih.gov/pubmed/28237675
http://dx.doi.org/10.1016/j.bjm.2016.10.025
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author Simões-Araújo, Jean Luiz
Rumjanek, Norma Gouvêa
Xavier, Gustavo Ribeiro
Zilli, Jerri Édson
author_facet Simões-Araújo, Jean Luiz
Rumjanek, Norma Gouvêa
Xavier, Gustavo Ribeiro
Zilli, Jerri Édson
author_sort Simões-Araújo, Jean Luiz
collection PubMed
description The strain BR 3351(T) (Bradyrhizobium manausense) was obtained from nodules of cowpea (Vigna unguiculata L. Walp) growing in soil collected from Amazon rainforest. Furthermore, it was observed that the strain has high capacity to fix nitrogen symbiotically in symbioses with cowpea. We report here the draft genome sequence of strain BR 3351(T). The information presented will be important for comparative analysis of nodulation and nitrogen fixation for diazotrophic bacteria. A draft genome with 9,145,311 bp and 62.9% of GC content was assembled in 127 scaffolds using 100 bp pair-end Illumina MiSeq system. The RAST annotation identified 8603 coding sequences, 51 RNAs genes, classified in 504 subsystems.
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spelling pubmed-56283662017-10-10 Draft genome sequence of Bradyrhizobium manausense strain BR 3351(T), an effective symbiont isolated from Amazon rainforest Simões-Araújo, Jean Luiz Rumjanek, Norma Gouvêa Xavier, Gustavo Ribeiro Zilli, Jerri Édson Braz J Microbiol Genome Announcement The strain BR 3351(T) (Bradyrhizobium manausense) was obtained from nodules of cowpea (Vigna unguiculata L. Walp) growing in soil collected from Amazon rainforest. Furthermore, it was observed that the strain has high capacity to fix nitrogen symbiotically in symbioses with cowpea. We report here the draft genome sequence of strain BR 3351(T). The information presented will be important for comparative analysis of nodulation and nitrogen fixation for diazotrophic bacteria. A draft genome with 9,145,311 bp and 62.9% of GC content was assembled in 127 scaffolds using 100 bp pair-end Illumina MiSeq system. The RAST annotation identified 8603 coding sequences, 51 RNAs genes, classified in 504 subsystems. Elsevier 2017-02-09 /pmc/articles/PMC5628366/ /pubmed/28237675 http://dx.doi.org/10.1016/j.bjm.2016.10.025 Text en http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Genome Announcement
Simões-Araújo, Jean Luiz
Rumjanek, Norma Gouvêa
Xavier, Gustavo Ribeiro
Zilli, Jerri Édson
Draft genome sequence of Bradyrhizobium manausense strain BR 3351(T), an effective symbiont isolated from Amazon rainforest
title Draft genome sequence of Bradyrhizobium manausense strain BR 3351(T), an effective symbiont isolated from Amazon rainforest
title_full Draft genome sequence of Bradyrhizobium manausense strain BR 3351(T), an effective symbiont isolated from Amazon rainforest
title_fullStr Draft genome sequence of Bradyrhizobium manausense strain BR 3351(T), an effective symbiont isolated from Amazon rainforest
title_full_unstemmed Draft genome sequence of Bradyrhizobium manausense strain BR 3351(T), an effective symbiont isolated from Amazon rainforest
title_short Draft genome sequence of Bradyrhizobium manausense strain BR 3351(T), an effective symbiont isolated from Amazon rainforest
title_sort draft genome sequence of bradyrhizobium manausense strain br 3351(t), an effective symbiont isolated from amazon rainforest
topic Genome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5628366/
https://www.ncbi.nlm.nih.gov/pubmed/28237675
http://dx.doi.org/10.1016/j.bjm.2016.10.025
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