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Using invariom modelling to distinguish correct and incorrect central atoms in ‘duplicate structures’ with neighbouring 3d elements

Modelling coordination compounds has been shown to be feasible using the invariom method; for the best fit to a given set of diffraction data, additional steps other than using lookup tables of scattering factors need to be carried out. Here such procedures are applied to a number of ‘duplicate stru...

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Detalles Bibliográficos
Autores principales: Wandtke, Claudia M., Weil, Matthias, Simpson, Jim, Dittrich, Birger
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5628397/
https://www.ncbi.nlm.nih.gov/pubmed/28980983
http://dx.doi.org/10.1107/S2052520617010745
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author Wandtke, Claudia M.
Weil, Matthias
Simpson, Jim
Dittrich, Birger
author_facet Wandtke, Claudia M.
Weil, Matthias
Simpson, Jim
Dittrich, Birger
author_sort Wandtke, Claudia M.
collection PubMed
description Modelling coordination compounds has been shown to be feasible using the invariom method; for the best fit to a given set of diffraction data, additional steps other than using lookup tables of scattering factors need to be carried out. Here such procedures are applied to a number of ‘duplicate structures’, where structures of two or more supposedly different coordination complexes with identical ligand environments, but with different 3d metal ions, were published. However, only one metal atom can be plausibly correct in these structures, and other spectroscopic data are unavailable. Using aspherical scattering factors, a structure can be identified as correct from the deposited Bragg intensities alone and modelling only the ligand environment often suffices to make this distinction. This is not possible in classical refinements using the independent atom model. Quantum-chemical computations of the better model obtained after aspherical-atom refinement further confirm the assignment of the element in the respective figures of merit.
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spelling pubmed-56283972017-10-11 Using invariom modelling to distinguish correct and incorrect central atoms in ‘duplicate structures’ with neighbouring 3d elements Wandtke, Claudia M. Weil, Matthias Simpson, Jim Dittrich, Birger Acta Crystallogr B Struct Sci Cryst Eng Mater Research Papers Modelling coordination compounds has been shown to be feasible using the invariom method; for the best fit to a given set of diffraction data, additional steps other than using lookup tables of scattering factors need to be carried out. Here such procedures are applied to a number of ‘duplicate structures’, where structures of two or more supposedly different coordination complexes with identical ligand environments, but with different 3d metal ions, were published. However, only one metal atom can be plausibly correct in these structures, and other spectroscopic data are unavailable. Using aspherical scattering factors, a structure can be identified as correct from the deposited Bragg intensities alone and modelling only the ligand environment often suffices to make this distinction. This is not possible in classical refinements using the independent atom model. Quantum-chemical computations of the better model obtained after aspherical-atom refinement further confirm the assignment of the element in the respective figures of merit. International Union of Crystallography 2017-09-29 /pmc/articles/PMC5628397/ /pubmed/28980983 http://dx.doi.org/10.1107/S2052520617010745 Text en © Wandtke et al. 2017 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/2.0/uk/
spellingShingle Research Papers
Wandtke, Claudia M.
Weil, Matthias
Simpson, Jim
Dittrich, Birger
Using invariom modelling to distinguish correct and incorrect central atoms in ‘duplicate structures’ with neighbouring 3d elements
title Using invariom modelling to distinguish correct and incorrect central atoms in ‘duplicate structures’ with neighbouring 3d elements
title_full Using invariom modelling to distinguish correct and incorrect central atoms in ‘duplicate structures’ with neighbouring 3d elements
title_fullStr Using invariom modelling to distinguish correct and incorrect central atoms in ‘duplicate structures’ with neighbouring 3d elements
title_full_unstemmed Using invariom modelling to distinguish correct and incorrect central atoms in ‘duplicate structures’ with neighbouring 3d elements
title_short Using invariom modelling to distinguish correct and incorrect central atoms in ‘duplicate structures’ with neighbouring 3d elements
title_sort using invariom modelling to distinguish correct and incorrect central atoms in ‘duplicate structures’ with neighbouring 3d elements
topic Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5628397/
https://www.ncbi.nlm.nih.gov/pubmed/28980983
http://dx.doi.org/10.1107/S2052520617010745
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