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LMO1 polymorphisms reduce neuroblastoma risk in Chinese children: a two-center case-control study
Previous genome-wide association and validation studies suggest that LIM domain only 1 (LMO1) gene polymorphisms affect neuroblastoma susceptibility. In this work, we used Taqman methodology to genotype four LMO1 polymorphisms (rs110419 A > G, rs4758051 G > A, rs10840002 A > G and rs204938...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals LLC
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5630358/ https://www.ncbi.nlm.nih.gov/pubmed/29029458 http://dx.doi.org/10.18632/oncotarget.20018 |
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author | Zhang, Jiao Lin, Huiran Wang, Jiaxiang He, Jing Zhang, Da Qin, Pan Yang, Lin Yan, Lizhao |
author_facet | Zhang, Jiao Lin, Huiran Wang, Jiaxiang He, Jing Zhang, Da Qin, Pan Yang, Lin Yan, Lizhao |
author_sort | Zhang, Jiao |
collection | PubMed |
description | Previous genome-wide association and validation studies suggest that LIM domain only 1 (LMO1) gene polymorphisms affect neuroblastoma susceptibility. In this work, we used Taqman methodology to genotype four LMO1 polymorphisms (rs110419 A > G, rs4758051 G > A, rs10840002 A > G and rs204938 A > G) in 118 neuroblastoma cases and 281 controls from Northern China. Odds ratios (ORs) and 95% confidence intervals (CIs) were used to evaluate the association. We found that rs4758051 G > A was associated with a decreased neuroblastoma risk (AA vs. GG: adjusted OR = 0.28, 95% CI = 0.13–0.62; AG/AA vs. GG: adjusted OR = 0.62, 95% CI = 0.40–0.97; AA vs. GG/AG: adjusted OR = 0.33, 95% CI = 0.15–0.69). Likewise, carrying the rs10840002 G allele was also associated with a decreased neuroblastoma risk in this Northern Chinese population. In a combination analysis using Southern and Northern Chinese populations, we found that those carrying the rs110419 G, rs4758051 A or rs10840002 G allele were at decreased neuroblastoma risk, and this finding was supported by a false-positive report probability analysis. These results further verify that LMO1 polymorphisms are protective against neuroblastoma. Case-control studies with larger samples and using other ethnicities are still needed to confirm our conclusion. |
format | Online Article Text |
id | pubmed-5630358 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Impact Journals LLC |
record_format | MEDLINE/PubMed |
spelling | pubmed-56303582017-10-12 LMO1 polymorphisms reduce neuroblastoma risk in Chinese children: a two-center case-control study Zhang, Jiao Lin, Huiran Wang, Jiaxiang He, Jing Zhang, Da Qin, Pan Yang, Lin Yan, Lizhao Oncotarget Research Paper Previous genome-wide association and validation studies suggest that LIM domain only 1 (LMO1) gene polymorphisms affect neuroblastoma susceptibility. In this work, we used Taqman methodology to genotype four LMO1 polymorphisms (rs110419 A > G, rs4758051 G > A, rs10840002 A > G and rs204938 A > G) in 118 neuroblastoma cases and 281 controls from Northern China. Odds ratios (ORs) and 95% confidence intervals (CIs) were used to evaluate the association. We found that rs4758051 G > A was associated with a decreased neuroblastoma risk (AA vs. GG: adjusted OR = 0.28, 95% CI = 0.13–0.62; AG/AA vs. GG: adjusted OR = 0.62, 95% CI = 0.40–0.97; AA vs. GG/AG: adjusted OR = 0.33, 95% CI = 0.15–0.69). Likewise, carrying the rs10840002 G allele was also associated with a decreased neuroblastoma risk in this Northern Chinese population. In a combination analysis using Southern and Northern Chinese populations, we found that those carrying the rs110419 G, rs4758051 A or rs10840002 G allele were at decreased neuroblastoma risk, and this finding was supported by a false-positive report probability analysis. These results further verify that LMO1 polymorphisms are protective against neuroblastoma. Case-control studies with larger samples and using other ethnicities are still needed to confirm our conclusion. Impact Journals LLC 2017-08-07 /pmc/articles/PMC5630358/ /pubmed/29029458 http://dx.doi.org/10.18632/oncotarget.20018 Text en Copyright: © 2017 Zhang et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/) 3.0 (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Zhang, Jiao Lin, Huiran Wang, Jiaxiang He, Jing Zhang, Da Qin, Pan Yang, Lin Yan, Lizhao LMO1 polymorphisms reduce neuroblastoma risk in Chinese children: a two-center case-control study |
title | LMO1 polymorphisms reduce neuroblastoma risk in Chinese children: a two-center case-control study |
title_full | LMO1 polymorphisms reduce neuroblastoma risk in Chinese children: a two-center case-control study |
title_fullStr | LMO1 polymorphisms reduce neuroblastoma risk in Chinese children: a two-center case-control study |
title_full_unstemmed | LMO1 polymorphisms reduce neuroblastoma risk in Chinese children: a two-center case-control study |
title_short | LMO1 polymorphisms reduce neuroblastoma risk in Chinese children: a two-center case-control study |
title_sort | lmo1 polymorphisms reduce neuroblastoma risk in chinese children: a two-center case-control study |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5630358/ https://www.ncbi.nlm.nih.gov/pubmed/29029458 http://dx.doi.org/10.18632/oncotarget.20018 |
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