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LMO1 polymorphisms reduce neuroblastoma risk in Chinese children: a two-center case-control study

Previous genome-wide association and validation studies suggest that LIM domain only 1 (LMO1) gene polymorphisms affect neuroblastoma susceptibility. In this work, we used Taqman methodology to genotype four LMO1 polymorphisms (rs110419 A > G, rs4758051 G > A, rs10840002 A > G and rs204938...

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Autores principales: Zhang, Jiao, Lin, Huiran, Wang, Jiaxiang, He, Jing, Zhang, Da, Qin, Pan, Yang, Lin, Yan, Lizhao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals LLC 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5630358/
https://www.ncbi.nlm.nih.gov/pubmed/29029458
http://dx.doi.org/10.18632/oncotarget.20018
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author Zhang, Jiao
Lin, Huiran
Wang, Jiaxiang
He, Jing
Zhang, Da
Qin, Pan
Yang, Lin
Yan, Lizhao
author_facet Zhang, Jiao
Lin, Huiran
Wang, Jiaxiang
He, Jing
Zhang, Da
Qin, Pan
Yang, Lin
Yan, Lizhao
author_sort Zhang, Jiao
collection PubMed
description Previous genome-wide association and validation studies suggest that LIM domain only 1 (LMO1) gene polymorphisms affect neuroblastoma susceptibility. In this work, we used Taqman methodology to genotype four LMO1 polymorphisms (rs110419 A > G, rs4758051 G > A, rs10840002 A > G and rs204938 A > G) in 118 neuroblastoma cases and 281 controls from Northern China. Odds ratios (ORs) and 95% confidence intervals (CIs) were used to evaluate the association. We found that rs4758051 G > A was associated with a decreased neuroblastoma risk (AA vs. GG: adjusted OR = 0.28, 95% CI = 0.13–0.62; AG/AA vs. GG: adjusted OR = 0.62, 95% CI = 0.40–0.97; AA vs. GG/AG: adjusted OR = 0.33, 95% CI = 0.15–0.69). Likewise, carrying the rs10840002 G allele was also associated with a decreased neuroblastoma risk in this Northern Chinese population. In a combination analysis using Southern and Northern Chinese populations, we found that those carrying the rs110419 G, rs4758051 A or rs10840002 G allele were at decreased neuroblastoma risk, and this finding was supported by a false-positive report probability analysis. These results further verify that LMO1 polymorphisms are protective against neuroblastoma. Case-control studies with larger samples and using other ethnicities are still needed to confirm our conclusion.
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spelling pubmed-56303582017-10-12 LMO1 polymorphisms reduce neuroblastoma risk in Chinese children: a two-center case-control study Zhang, Jiao Lin, Huiran Wang, Jiaxiang He, Jing Zhang, Da Qin, Pan Yang, Lin Yan, Lizhao Oncotarget Research Paper Previous genome-wide association and validation studies suggest that LIM domain only 1 (LMO1) gene polymorphisms affect neuroblastoma susceptibility. In this work, we used Taqman methodology to genotype four LMO1 polymorphisms (rs110419 A > G, rs4758051 G > A, rs10840002 A > G and rs204938 A > G) in 118 neuroblastoma cases and 281 controls from Northern China. Odds ratios (ORs) and 95% confidence intervals (CIs) were used to evaluate the association. We found that rs4758051 G > A was associated with a decreased neuroblastoma risk (AA vs. GG: adjusted OR = 0.28, 95% CI = 0.13–0.62; AG/AA vs. GG: adjusted OR = 0.62, 95% CI = 0.40–0.97; AA vs. GG/AG: adjusted OR = 0.33, 95% CI = 0.15–0.69). Likewise, carrying the rs10840002 G allele was also associated with a decreased neuroblastoma risk in this Northern Chinese population. In a combination analysis using Southern and Northern Chinese populations, we found that those carrying the rs110419 G, rs4758051 A or rs10840002 G allele were at decreased neuroblastoma risk, and this finding was supported by a false-positive report probability analysis. These results further verify that LMO1 polymorphisms are protective against neuroblastoma. Case-control studies with larger samples and using other ethnicities are still needed to confirm our conclusion. Impact Journals LLC 2017-08-07 /pmc/articles/PMC5630358/ /pubmed/29029458 http://dx.doi.org/10.18632/oncotarget.20018 Text en Copyright: © 2017 Zhang et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/) 3.0 (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Zhang, Jiao
Lin, Huiran
Wang, Jiaxiang
He, Jing
Zhang, Da
Qin, Pan
Yang, Lin
Yan, Lizhao
LMO1 polymorphisms reduce neuroblastoma risk in Chinese children: a two-center case-control study
title LMO1 polymorphisms reduce neuroblastoma risk in Chinese children: a two-center case-control study
title_full LMO1 polymorphisms reduce neuroblastoma risk in Chinese children: a two-center case-control study
title_fullStr LMO1 polymorphisms reduce neuroblastoma risk in Chinese children: a two-center case-control study
title_full_unstemmed LMO1 polymorphisms reduce neuroblastoma risk in Chinese children: a two-center case-control study
title_short LMO1 polymorphisms reduce neuroblastoma risk in Chinese children: a two-center case-control study
title_sort lmo1 polymorphisms reduce neuroblastoma risk in chinese children: a two-center case-control study
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5630358/
https://www.ncbi.nlm.nih.gov/pubmed/29029458
http://dx.doi.org/10.18632/oncotarget.20018
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