Cargando…
DNA metabarcoding and morphological macroinvertebrate metrics reveal the same changes in boreal watersheds across an environmental gradient
Cost-effective, ecologically relevant, sensitive, and standardized indicators are requisites of biomonitoring. DNA metabarcoding of macroinvertebrate communities is a potentially transformative biomonitoring technique that can reduce cost and time constraints while providing information-rich, high r...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5630640/ https://www.ncbi.nlm.nih.gov/pubmed/28986575 http://dx.doi.org/10.1038/s41598-017-13157-x |
_version_ | 1783269260977504256 |
---|---|
author | Emilson, Caroline E. Thompson, Dean G. Venier, Lisa A. Porter, Teresita M. Swystun, Tom Chartrand, Derek Capell, Scott Hajibabaei, Mehrdad |
author_facet | Emilson, Caroline E. Thompson, Dean G. Venier, Lisa A. Porter, Teresita M. Swystun, Tom Chartrand, Derek Capell, Scott Hajibabaei, Mehrdad |
author_sort | Emilson, Caroline E. |
collection | PubMed |
description | Cost-effective, ecologically relevant, sensitive, and standardized indicators are requisites of biomonitoring. DNA metabarcoding of macroinvertebrate communities is a potentially transformative biomonitoring technique that can reduce cost and time constraints while providing information-rich, high resolution taxonomic data for the assessment of watershed condition. Here, we assess the utility of DNA metabarcoding to provide aquatic indicator data for evaluation of forested watershed condition across Canadian eastern boreal watersheds, subject to natural variation and low-intensity harvest management. We do this by comparing the similarity of DNA metabarcoding and morphologically derived macroinvertebrate metrics (i.e. richness, % Ephemeroptera, Plecoptera and Trichoptera, % chironomid), and the ability of DNA metabarcoding and morphological metrics to detect key gradients in stream condition linked to forested watershed features. Our results show consistency between methods, where common DNA metabarcoding and morphological macroinvertebrate metrics are positively correlated and indicate the same key gradients in stream condition (i.e. dissolved oxygen, and dissolved organic carbon, total nitrogen and conductivity) linked to watershed size and shifts in forest composition across watersheds. Our study demonstrates the potential usefulness of macroinvertebrate DNA metabarcoding to future application in broad-scale biomonitoring of watershed condition across environmental gradients. |
format | Online Article Text |
id | pubmed-5630640 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-56306402017-10-17 DNA metabarcoding and morphological macroinvertebrate metrics reveal the same changes in boreal watersheds across an environmental gradient Emilson, Caroline E. Thompson, Dean G. Venier, Lisa A. Porter, Teresita M. Swystun, Tom Chartrand, Derek Capell, Scott Hajibabaei, Mehrdad Sci Rep Article Cost-effective, ecologically relevant, sensitive, and standardized indicators are requisites of biomonitoring. DNA metabarcoding of macroinvertebrate communities is a potentially transformative biomonitoring technique that can reduce cost and time constraints while providing information-rich, high resolution taxonomic data for the assessment of watershed condition. Here, we assess the utility of DNA metabarcoding to provide aquatic indicator data for evaluation of forested watershed condition across Canadian eastern boreal watersheds, subject to natural variation and low-intensity harvest management. We do this by comparing the similarity of DNA metabarcoding and morphologically derived macroinvertebrate metrics (i.e. richness, % Ephemeroptera, Plecoptera and Trichoptera, % chironomid), and the ability of DNA metabarcoding and morphological metrics to detect key gradients in stream condition linked to forested watershed features. Our results show consistency between methods, where common DNA metabarcoding and morphological macroinvertebrate metrics are positively correlated and indicate the same key gradients in stream condition (i.e. dissolved oxygen, and dissolved organic carbon, total nitrogen and conductivity) linked to watershed size and shifts in forest composition across watersheds. Our study demonstrates the potential usefulness of macroinvertebrate DNA metabarcoding to future application in broad-scale biomonitoring of watershed condition across environmental gradients. Nature Publishing Group UK 2017-10-06 /pmc/articles/PMC5630640/ /pubmed/28986575 http://dx.doi.org/10.1038/s41598-017-13157-x Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Emilson, Caroline E. Thompson, Dean G. Venier, Lisa A. Porter, Teresita M. Swystun, Tom Chartrand, Derek Capell, Scott Hajibabaei, Mehrdad DNA metabarcoding and morphological macroinvertebrate metrics reveal the same changes in boreal watersheds across an environmental gradient |
title | DNA metabarcoding and morphological macroinvertebrate metrics reveal the same changes in boreal watersheds across an environmental gradient |
title_full | DNA metabarcoding and morphological macroinvertebrate metrics reveal the same changes in boreal watersheds across an environmental gradient |
title_fullStr | DNA metabarcoding and morphological macroinvertebrate metrics reveal the same changes in boreal watersheds across an environmental gradient |
title_full_unstemmed | DNA metabarcoding and morphological macroinvertebrate metrics reveal the same changes in boreal watersheds across an environmental gradient |
title_short | DNA metabarcoding and morphological macroinvertebrate metrics reveal the same changes in boreal watersheds across an environmental gradient |
title_sort | dna metabarcoding and morphological macroinvertebrate metrics reveal the same changes in boreal watersheds across an environmental gradient |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5630640/ https://www.ncbi.nlm.nih.gov/pubmed/28986575 http://dx.doi.org/10.1038/s41598-017-13157-x |
work_keys_str_mv | AT emilsoncarolinee dnametabarcodingandmorphologicalmacroinvertebratemetricsrevealthesamechangesinborealwatershedsacrossanenvironmentalgradient AT thompsondeang dnametabarcodingandmorphologicalmacroinvertebratemetricsrevealthesamechangesinborealwatershedsacrossanenvironmentalgradient AT venierlisaa dnametabarcodingandmorphologicalmacroinvertebratemetricsrevealthesamechangesinborealwatershedsacrossanenvironmentalgradient AT porterteresitam dnametabarcodingandmorphologicalmacroinvertebratemetricsrevealthesamechangesinborealwatershedsacrossanenvironmentalgradient AT swystuntom dnametabarcodingandmorphologicalmacroinvertebratemetricsrevealthesamechangesinborealwatershedsacrossanenvironmentalgradient AT chartrandderek dnametabarcodingandmorphologicalmacroinvertebratemetricsrevealthesamechangesinborealwatershedsacrossanenvironmentalgradient AT capellscott dnametabarcodingandmorphologicalmacroinvertebratemetricsrevealthesamechangesinborealwatershedsacrossanenvironmentalgradient AT hajibabaeimehrdad dnametabarcodingandmorphologicalmacroinvertebratemetricsrevealthesamechangesinborealwatershedsacrossanenvironmentalgradient |