Cargando…

Validating distribution models for twelve endemic bird species of tropical dry forest in western Mexico

Considering the high biodiversity and conservation concerns of the tropical dry forest, this study aim is to predict and evaluate the potential and current distributions of twelve species of endemic birds which distribute along the western slope of Mexico. The main goal is to evaluate altogether dif...

Descripción completa

Detalles Bibliográficos
Autores principales: Ortega‐Huerta, Miguel A., Vega‐Rivera, Jorge H.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5632607/
https://www.ncbi.nlm.nih.gov/pubmed/29043024
http://dx.doi.org/10.1002/ece3.3160
_version_ 1783269730172272640
author Ortega‐Huerta, Miguel A.
Vega‐Rivera, Jorge H.
author_facet Ortega‐Huerta, Miguel A.
Vega‐Rivera, Jorge H.
author_sort Ortega‐Huerta, Miguel A.
collection PubMed
description Considering the high biodiversity and conservation concerns of the tropical dry forest, this study aim is to predict and evaluate the potential and current distributions of twelve species of endemic birds which distribute along the western slope of Mexico. The main goal is to evaluate altogether different methods for predicting actual species distribution models (ADMs) of the twelve species including the identification of key environmental potential limiting factors. ADMs for twelve endemic Mexican birds were generated and validated by means of applying: (1) three widely used species niche modeling approaches (ENFA, Garp, and Maxent); (2) two thresholding methods, based on ROC curves and Kappa Index, for transforming continuous models to presence/absence (binary) models; (3) documented habitat–species associations for reducing species potential distribution models (PDMs); and (4) field occurrence data for validating final ADMs. Binary PDMs' predicted areas seemed overestimated, while ADMs looked drastically reduced and fragmented because of the approach taken for eliminating those predicted areas which were documented as unsuitable habitat types for individual species. Results indicated that both thresholding methods generated similar threshold values for species modeled by each of the three species distribution modeling algorithms (SDMAs). A Wilcoxon signed‐rank test, however, showed that Kappa values were generally higher than ROC curve for species modeled by ENFA and Maxent, while for Garp models there were no significant differences. Prediction success (e.g., true presences percentage) obtained from field occurrence data revealed a range of 50%–82% among the 12 species. The three modeling approaches applied enabled to test the application of two thresholding methods for transforming continuous to binary (presence/absence) models. The use of documented habitat preferences resulted in drastic reductions and fragmentation of PDMs. However, ADMs predictive success rate, tested using field species occurrence data, varied between 50 and 82%.
format Online
Article
Text
id pubmed-5632607
institution National Center for Biotechnology Information
language English
publishDate 2017
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-56326072017-10-17 Validating distribution models for twelve endemic bird species of tropical dry forest in western Mexico Ortega‐Huerta, Miguel A. Vega‐Rivera, Jorge H. Ecol Evol Original Research Considering the high biodiversity and conservation concerns of the tropical dry forest, this study aim is to predict and evaluate the potential and current distributions of twelve species of endemic birds which distribute along the western slope of Mexico. The main goal is to evaluate altogether different methods for predicting actual species distribution models (ADMs) of the twelve species including the identification of key environmental potential limiting factors. ADMs for twelve endemic Mexican birds were generated and validated by means of applying: (1) three widely used species niche modeling approaches (ENFA, Garp, and Maxent); (2) two thresholding methods, based on ROC curves and Kappa Index, for transforming continuous models to presence/absence (binary) models; (3) documented habitat–species associations for reducing species potential distribution models (PDMs); and (4) field occurrence data for validating final ADMs. Binary PDMs' predicted areas seemed overestimated, while ADMs looked drastically reduced and fragmented because of the approach taken for eliminating those predicted areas which were documented as unsuitable habitat types for individual species. Results indicated that both thresholding methods generated similar threshold values for species modeled by each of the three species distribution modeling algorithms (SDMAs). A Wilcoxon signed‐rank test, however, showed that Kappa values were generally higher than ROC curve for species modeled by ENFA and Maxent, while for Garp models there were no significant differences. Prediction success (e.g., true presences percentage) obtained from field occurrence data revealed a range of 50%–82% among the 12 species. The three modeling approaches applied enabled to test the application of two thresholding methods for transforming continuous to binary (presence/absence) models. The use of documented habitat preferences resulted in drastic reductions and fragmentation of PDMs. However, ADMs predictive success rate, tested using field species occurrence data, varied between 50 and 82%. John Wiley and Sons Inc. 2017-08-19 /pmc/articles/PMC5632607/ /pubmed/29043024 http://dx.doi.org/10.1002/ece3.3160 Text en © 2017 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research
Ortega‐Huerta, Miguel A.
Vega‐Rivera, Jorge H.
Validating distribution models for twelve endemic bird species of tropical dry forest in western Mexico
title Validating distribution models for twelve endemic bird species of tropical dry forest in western Mexico
title_full Validating distribution models for twelve endemic bird species of tropical dry forest in western Mexico
title_fullStr Validating distribution models for twelve endemic bird species of tropical dry forest in western Mexico
title_full_unstemmed Validating distribution models for twelve endemic bird species of tropical dry forest in western Mexico
title_short Validating distribution models for twelve endemic bird species of tropical dry forest in western Mexico
title_sort validating distribution models for twelve endemic bird species of tropical dry forest in western mexico
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5632607/
https://www.ncbi.nlm.nih.gov/pubmed/29043024
http://dx.doi.org/10.1002/ece3.3160
work_keys_str_mv AT ortegahuertamiguela validatingdistributionmodelsfortwelveendemicbirdspeciesoftropicaldryforestinwesternmexico
AT vegariverajorgeh validatingdistributionmodelsfortwelveendemicbirdspeciesoftropicaldryforestinwesternmexico