Cargando…
Case Report: Whole exome sequencing identifies variation c.2308G>A p.E770K in RAG1 associated with B- T- NK+ severe combined immunodeficiency
Severe combined immunodeficiency is a large clinically heterogeneous group of disorders caused by a defect in the development of humoral or cellular immune responses. At least 13 genes are known to be involved in the pathophysiology of the disease and the mutation spectrum in SCID has been well docu...
Autores principales: | , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
F1000Research
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5635439/ https://www.ncbi.nlm.nih.gov/pubmed/29067161 http://dx.doi.org/10.12688/f1000research.9473.2 |
_version_ | 1783270286447083520 |
---|---|
author | Govindaraj, Geeta Madathil Karuthedath Vellarikkal, Shamsudheen Jayarajan, Rijith Ravi, Rowmika Verma, Ankit Chakkiyar, Krishnan Jayakrishnan, Machinari Puthenpurayil Arakkal, Riyaz Raj, Revathi Kunnaruvath, Rajeevan Sivasubbu, Sridhar Scaria, Vinod |
author_facet | Govindaraj, Geeta Madathil Karuthedath Vellarikkal, Shamsudheen Jayarajan, Rijith Ravi, Rowmika Verma, Ankit Chakkiyar, Krishnan Jayakrishnan, Machinari Puthenpurayil Arakkal, Riyaz Raj, Revathi Kunnaruvath, Rajeevan Sivasubbu, Sridhar Scaria, Vinod |
author_sort | Govindaraj, Geeta Madathil |
collection | PubMed |
description | Severe combined immunodeficiency is a large clinically heterogeneous group of disorders caused by a defect in the development of humoral or cellular immune responses. At least 13 genes are known to be involved in the pathophysiology of the disease and the mutation spectrum in SCID has been well documented. Mutations of the recombination-activating genes RAG 1 and RAG 2 are associated with a range of clinical presentations including, severe combined immunodeficiency and autoimmunity. Recently, our understanding of the molecular basis of immune dysfunction in RAG deficiency has improved tremendously with newer insights into the ultrastructure of the RAG complex. In this report, we describe the application of whole exome sequencing for arriving at a molecular diagnosis in a child suffering from B- T- NK+ severe combined immunodeficiency. Apart from making the accurate molecular diagnosis, we also add a genetic variation c.2308G>A p.E770K to the compendium of variations associated with the disease. |
format | Online Article Text |
id | pubmed-5635439 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | F1000Research |
record_format | MEDLINE/PubMed |
spelling | pubmed-56354392017-10-23 Case Report: Whole exome sequencing identifies variation c.2308G>A p.E770K in RAG1 associated with B- T- NK+ severe combined immunodeficiency Govindaraj, Geeta Madathil Karuthedath Vellarikkal, Shamsudheen Jayarajan, Rijith Ravi, Rowmika Verma, Ankit Chakkiyar, Krishnan Jayakrishnan, Machinari Puthenpurayil Arakkal, Riyaz Raj, Revathi Kunnaruvath, Rajeevan Sivasubbu, Sridhar Scaria, Vinod F1000Res Case Report Severe combined immunodeficiency is a large clinically heterogeneous group of disorders caused by a defect in the development of humoral or cellular immune responses. At least 13 genes are known to be involved in the pathophysiology of the disease and the mutation spectrum in SCID has been well documented. Mutations of the recombination-activating genes RAG 1 and RAG 2 are associated with a range of clinical presentations including, severe combined immunodeficiency and autoimmunity. Recently, our understanding of the molecular basis of immune dysfunction in RAG deficiency has improved tremendously with newer insights into the ultrastructure of the RAG complex. In this report, we describe the application of whole exome sequencing for arriving at a molecular diagnosis in a child suffering from B- T- NK+ severe combined immunodeficiency. Apart from making the accurate molecular diagnosis, we also add a genetic variation c.2308G>A p.E770K to the compendium of variations associated with the disease. F1000Research 2017-10-02 /pmc/articles/PMC5635439/ /pubmed/29067161 http://dx.doi.org/10.12688/f1000research.9473.2 Text en Copyright: © 2017 Govindaraj GM et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Case Report Govindaraj, Geeta Madathil Karuthedath Vellarikkal, Shamsudheen Jayarajan, Rijith Ravi, Rowmika Verma, Ankit Chakkiyar, Krishnan Jayakrishnan, Machinari Puthenpurayil Arakkal, Riyaz Raj, Revathi Kunnaruvath, Rajeevan Sivasubbu, Sridhar Scaria, Vinod Case Report: Whole exome sequencing identifies variation c.2308G>A p.E770K in RAG1 associated with B- T- NK+ severe combined immunodeficiency |
title | Case Report: Whole exome sequencing identifies variation c.2308G>A p.E770K in
RAG1 associated with B- T- NK+ severe combined immunodeficiency |
title_full | Case Report: Whole exome sequencing identifies variation c.2308G>A p.E770K in
RAG1 associated with B- T- NK+ severe combined immunodeficiency |
title_fullStr | Case Report: Whole exome sequencing identifies variation c.2308G>A p.E770K in
RAG1 associated with B- T- NK+ severe combined immunodeficiency |
title_full_unstemmed | Case Report: Whole exome sequencing identifies variation c.2308G>A p.E770K in
RAG1 associated with B- T- NK+ severe combined immunodeficiency |
title_short | Case Report: Whole exome sequencing identifies variation c.2308G>A p.E770K in
RAG1 associated with B- T- NK+ severe combined immunodeficiency |
title_sort | case report: whole exome sequencing identifies variation c.2308g>a p.e770k in
rag1 associated with b- t- nk+ severe combined immunodeficiency |
topic | Case Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5635439/ https://www.ncbi.nlm.nih.gov/pubmed/29067161 http://dx.doi.org/10.12688/f1000research.9473.2 |
work_keys_str_mv | AT govindarajgeetamadathil casereportwholeexomesequencingidentifiesvariationc2308gape770kinrag1associatedwithbtnkseverecombinedimmunodeficiency AT karuthedathvellarikkalshamsudheen casereportwholeexomesequencingidentifiesvariationc2308gape770kinrag1associatedwithbtnkseverecombinedimmunodeficiency AT jayarajanrijith casereportwholeexomesequencingidentifiesvariationc2308gape770kinrag1associatedwithbtnkseverecombinedimmunodeficiency AT ravirowmika casereportwholeexomesequencingidentifiesvariationc2308gape770kinrag1associatedwithbtnkseverecombinedimmunodeficiency AT vermaankit casereportwholeexomesequencingidentifiesvariationc2308gape770kinrag1associatedwithbtnkseverecombinedimmunodeficiency AT chakkiyarkrishnan casereportwholeexomesequencingidentifiesvariationc2308gape770kinrag1associatedwithbtnkseverecombinedimmunodeficiency AT jayakrishnanmachinariputhenpurayil casereportwholeexomesequencingidentifiesvariationc2308gape770kinrag1associatedwithbtnkseverecombinedimmunodeficiency AT arakkalriyaz casereportwholeexomesequencingidentifiesvariationc2308gape770kinrag1associatedwithbtnkseverecombinedimmunodeficiency AT rajrevathi casereportwholeexomesequencingidentifiesvariationc2308gape770kinrag1associatedwithbtnkseverecombinedimmunodeficiency AT kunnaruvathrajeevan casereportwholeexomesequencingidentifiesvariationc2308gape770kinrag1associatedwithbtnkseverecombinedimmunodeficiency AT sivasubbusridhar casereportwholeexomesequencingidentifiesvariationc2308gape770kinrag1associatedwithbtnkseverecombinedimmunodeficiency AT scariavinod casereportwholeexomesequencingidentifiesvariationc2308gape770kinrag1associatedwithbtnkseverecombinedimmunodeficiency |