Detection and Whole-Genome Analysis of a Zoonotic G8P[14] Rotavirus Strain Isolated from a Child with Diarrhea

The group A rotavirus strain SI-2987/09 was detected in a child with severe diarrhea. The whole-genome analysis revealed the G8-P[14]-I2-R2-C2-M2-A3-N2-T6-E2-H3 genome constellation, which reflects the zoonotic transmission of the strain most probably from the ungulate group. This was also confirmed...

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Autores principales: Steyer, Andrej, Naglič, Tina, Jamnikar-Ciglenečki, Urška, Kuhar, Urška
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2017
Materias:
Viruses
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5637500/
https://www.ncbi.nlm.nih.gov/pubmed/29025940
http://dx.doi.org/10.1128/genomeA.01053-17
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author Steyer, Andrej
Naglič, Tina
Jamnikar-Ciglenečki, Urška
Kuhar, Urška
author_facet Steyer, Andrej
Naglič, Tina
Jamnikar-Ciglenečki, Urška
Kuhar, Urška
author_sort Steyer, Andrej
collection PubMed
description The group A rotavirus strain SI-2987/09 was detected in a child with severe diarrhea. The whole-genome analysis revealed the G8-P[14]-I2-R2-C2-M2-A3-N2-T6-E2-H3 genome constellation, which reflects the zoonotic transmission of the strain most probably from the ungulate group. This was also confirmed by the high nucleotide identity to those animal rotavirus strains.
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spelling pubmed-56375002017-10-13 Detection and Whole-Genome Analysis of a Zoonotic G8P[14] Rotavirus Strain Isolated from a Child with Diarrhea Steyer, Andrej Naglič, Tina Jamnikar-Ciglenečki, Urška Kuhar, Urška Genome Announc Viruses The group A rotavirus strain SI-2987/09 was detected in a child with severe diarrhea. The whole-genome analysis revealed the G8-P[14]-I2-R2-C2-M2-A3-N2-T6-E2-H3 genome constellation, which reflects the zoonotic transmission of the strain most probably from the ungulate group. This was also confirmed by the high nucleotide identity to those animal rotavirus strains. American Society for Microbiology 2017-10-12 /pmc/articles/PMC5637500/ /pubmed/29025940 http://dx.doi.org/10.1128/genomeA.01053-17 Text en Copyright © 2017 Steyer et al. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Viruses
Steyer, Andrej
Naglič, Tina
Jamnikar-Ciglenečki, Urška
Kuhar, Urška
Detection and Whole-Genome Analysis of a Zoonotic G8P[14] Rotavirus Strain Isolated from a Child with Diarrhea
title Detection and Whole-Genome Analysis of a Zoonotic G8P[14] Rotavirus Strain Isolated from a Child with Diarrhea
title_full Detection and Whole-Genome Analysis of a Zoonotic G8P[14] Rotavirus Strain Isolated from a Child with Diarrhea
title_fullStr Detection and Whole-Genome Analysis of a Zoonotic G8P[14] Rotavirus Strain Isolated from a Child with Diarrhea
title_full_unstemmed Detection and Whole-Genome Analysis of a Zoonotic G8P[14] Rotavirus Strain Isolated from a Child with Diarrhea
title_short Detection and Whole-Genome Analysis of a Zoonotic G8P[14] Rotavirus Strain Isolated from a Child with Diarrhea
title_sort detection and whole-genome analysis of a zoonotic g8p[14] rotavirus strain isolated from a child with diarrhea
topic Viruses
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5637500/
https://www.ncbi.nlm.nih.gov/pubmed/29025940
http://dx.doi.org/10.1128/genomeA.01053-17
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