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Early evolution of the land plant circadian clock

While angiosperm clocks can be described as an intricate network of interlocked transcriptional feedback loops, clocks of green algae have been modelled as a loop of only two genes. To investigate the transition from a simple clock in algae to a complex one in angiosperms, we performed an inventory...

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Autores principales: Linde, Anna‐Malin, Eklund, D. Magnus, Kubota, Akane, Pederson, Eric R. A., Holm, Karl, Gyllenstrand, Niclas, Nishihama, Ryuichi, Cronberg, Nils, Muranaka, Tomoaki, Oyama, Tokitaka, Kohchi, Takayuki, Lagercrantz, Ulf
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5638080/
https://www.ncbi.nlm.nih.gov/pubmed/28244104
http://dx.doi.org/10.1111/nph.14487
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author Linde, Anna‐Malin
Eklund, D. Magnus
Kubota, Akane
Pederson, Eric R. A.
Holm, Karl
Gyllenstrand, Niclas
Nishihama, Ryuichi
Cronberg, Nils
Muranaka, Tomoaki
Oyama, Tokitaka
Kohchi, Takayuki
Lagercrantz, Ulf
author_facet Linde, Anna‐Malin
Eklund, D. Magnus
Kubota, Akane
Pederson, Eric R. A.
Holm, Karl
Gyllenstrand, Niclas
Nishihama, Ryuichi
Cronberg, Nils
Muranaka, Tomoaki
Oyama, Tokitaka
Kohchi, Takayuki
Lagercrantz, Ulf
author_sort Linde, Anna‐Malin
collection PubMed
description While angiosperm clocks can be described as an intricate network of interlocked transcriptional feedback loops, clocks of green algae have been modelled as a loop of only two genes. To investigate the transition from a simple clock in algae to a complex one in angiosperms, we performed an inventory of circadian clock genes in bryophytes and charophytes. Additionally, we performed functional characterization of putative core clock genes in the liverwort Marchantia polymorpha and the hornwort Anthoceros agrestis. Phylogenetic construction was combined with studies of spatiotemporal expression patterns and analysis of M. polymorpha clock gene mutants. Homologues to core clock genes identified in Arabidopsis were found not only in bryophytes but also in charophytes, albeit in fewer copies. Circadian rhythms were detected for most identified genes in M. polymorpha and A. agrestis, and mutant analysis supports a role for putative clock genes in M. polymorpha. Our data are in line with a recent hypothesis that adaptation to terrestrial life occurred earlier than previously expected in the evolutionary history of charophyte algae. Both gene duplication and acquisition of new genes was important in the evolution of the plant circadian clock, but gene loss has also contributed to shaping the clock of bryophytes.
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spelling pubmed-56380802017-10-25 Early evolution of the land plant circadian clock Linde, Anna‐Malin Eklund, D. Magnus Kubota, Akane Pederson, Eric R. A. Holm, Karl Gyllenstrand, Niclas Nishihama, Ryuichi Cronberg, Nils Muranaka, Tomoaki Oyama, Tokitaka Kohchi, Takayuki Lagercrantz, Ulf New Phytol Research While angiosperm clocks can be described as an intricate network of interlocked transcriptional feedback loops, clocks of green algae have been modelled as a loop of only two genes. To investigate the transition from a simple clock in algae to a complex one in angiosperms, we performed an inventory of circadian clock genes in bryophytes and charophytes. Additionally, we performed functional characterization of putative core clock genes in the liverwort Marchantia polymorpha and the hornwort Anthoceros agrestis. Phylogenetic construction was combined with studies of spatiotemporal expression patterns and analysis of M. polymorpha clock gene mutants. Homologues to core clock genes identified in Arabidopsis were found not only in bryophytes but also in charophytes, albeit in fewer copies. Circadian rhythms were detected for most identified genes in M. polymorpha and A. agrestis, and mutant analysis supports a role for putative clock genes in M. polymorpha. Our data are in line with a recent hypothesis that adaptation to terrestrial life occurred earlier than previously expected in the evolutionary history of charophyte algae. Both gene duplication and acquisition of new genes was important in the evolution of the plant circadian clock, but gene loss has also contributed to shaping the clock of bryophytes. John Wiley and Sons Inc. 2017-02-28 2017-10 /pmc/articles/PMC5638080/ /pubmed/28244104 http://dx.doi.org/10.1111/nph.14487 Text en © 2017 The Authors. New Phytologist © 2017 New Phytologist Trust This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research
Linde, Anna‐Malin
Eklund, D. Magnus
Kubota, Akane
Pederson, Eric R. A.
Holm, Karl
Gyllenstrand, Niclas
Nishihama, Ryuichi
Cronberg, Nils
Muranaka, Tomoaki
Oyama, Tokitaka
Kohchi, Takayuki
Lagercrantz, Ulf
Early evolution of the land plant circadian clock
title Early evolution of the land plant circadian clock
title_full Early evolution of the land plant circadian clock
title_fullStr Early evolution of the land plant circadian clock
title_full_unstemmed Early evolution of the land plant circadian clock
title_short Early evolution of the land plant circadian clock
title_sort early evolution of the land plant circadian clock
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5638080/
https://www.ncbi.nlm.nih.gov/pubmed/28244104
http://dx.doi.org/10.1111/nph.14487
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