Cargando…
Norine: A powerful resource for novel nonribosomal peptide discovery
Since its first release in 2008, Norine remains the unique resource completely devoted to nonribosomal peptides (NRPs). They are very attractive microbial secondary metabolites, displaying a remarkable diversity of structure and functions. Norine (http://bioinfo.lifl.fr/NRP) includes a database now...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
KeAi Publishing
2015
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5640699/ https://www.ncbi.nlm.nih.gov/pubmed/29082924 http://dx.doi.org/10.1016/j.synbio.2015.11.001 |
_version_ | 1783271080911175680 |
---|---|
author | Pupin, M. Esmaeel, Q. Flissi, A. Dufresne, Y. Jacques, P. Leclère, V. |
author_facet | Pupin, M. Esmaeel, Q. Flissi, A. Dufresne, Y. Jacques, P. Leclère, V. |
author_sort | Pupin, M. |
collection | PubMed |
description | Since its first release in 2008, Norine remains the unique resource completely devoted to nonribosomal peptides (NRPs). They are very attractive microbial secondary metabolites, displaying a remarkable diversity of structure and functions. Norine (http://bioinfo.lifl.fr/NRP) includes a database now containing more than 1160 annotated peptides and user-friendly interfaces enabling the querying of the database, through the annotations or the structure of the peptides. Dedicated tools are associated for structural comparison of the compounds and prediction of their biological activities. In this paper, we start by describing the knowledgebase and the dedicated tools. We then present some user cases to show how useful Norine is for the discovery of novel nonribosomal peptides. |
format | Online Article Text |
id | pubmed-5640699 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | KeAi Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-56406992017-10-23 Norine: A powerful resource for novel nonribosomal peptide discovery Pupin, M. Esmaeel, Q. Flissi, A. Dufresne, Y. Jacques, P. Leclère, V. Synth Syst Biotechnol Article Since its first release in 2008, Norine remains the unique resource completely devoted to nonribosomal peptides (NRPs). They are very attractive microbial secondary metabolites, displaying a remarkable diversity of structure and functions. Norine (http://bioinfo.lifl.fr/NRP) includes a database now containing more than 1160 annotated peptides and user-friendly interfaces enabling the querying of the database, through the annotations or the structure of the peptides. Dedicated tools are associated for structural comparison of the compounds and prediction of their biological activities. In this paper, we start by describing the knowledgebase and the dedicated tools. We then present some user cases to show how useful Norine is for the discovery of novel nonribosomal peptides. KeAi Publishing 2015-12-08 /pmc/articles/PMC5640699/ /pubmed/29082924 http://dx.doi.org/10.1016/j.synbio.2015.11.001 Text en © 2016 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Article Pupin, M. Esmaeel, Q. Flissi, A. Dufresne, Y. Jacques, P. Leclère, V. Norine: A powerful resource for novel nonribosomal peptide discovery |
title | Norine: A powerful resource for novel nonribosomal peptide discovery |
title_full | Norine: A powerful resource for novel nonribosomal peptide discovery |
title_fullStr | Norine: A powerful resource for novel nonribosomal peptide discovery |
title_full_unstemmed | Norine: A powerful resource for novel nonribosomal peptide discovery |
title_short | Norine: A powerful resource for novel nonribosomal peptide discovery |
title_sort | norine: a powerful resource for novel nonribosomal peptide discovery |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5640699/ https://www.ncbi.nlm.nih.gov/pubmed/29082924 http://dx.doi.org/10.1016/j.synbio.2015.11.001 |
work_keys_str_mv | AT pupinm norineapowerfulresourcefornovelnonribosomalpeptidediscovery AT esmaeelq norineapowerfulresourcefornovelnonribosomalpeptidediscovery AT flissia norineapowerfulresourcefornovelnonribosomalpeptidediscovery AT dufresney norineapowerfulresourcefornovelnonribosomalpeptidediscovery AT jacquesp norineapowerfulresourcefornovelnonribosomalpeptidediscovery AT leclerev norineapowerfulresourcefornovelnonribosomalpeptidediscovery |