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A potential panel of two-long non-coding RNA signature to predict recurrence of patients with laryngeal cancer

Accumulating evidence has shown that aberrant lncRNA expression plays an oncogenic or tumor-suppressive role in the tumorigenesis of laryngeal cancer. However, the prognostic roles of lncRNAs in laryngeal cancer recurrence are still poorly understood. In this study, we obtained lncRNA expression pro...

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Autores principales: Bai, Zhigang, Shi, Enhong, Wang, Qiwei, Dong, Zhouwei, Xu, Ping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals LLC 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5642505/
https://www.ncbi.nlm.nih.gov/pubmed/29050230
http://dx.doi.org/10.18632/oncotarget.18751
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author Bai, Zhigang
Shi, Enhong
Wang, Qiwei
Dong, Zhouwei
Xu, Ping
author_facet Bai, Zhigang
Shi, Enhong
Wang, Qiwei
Dong, Zhouwei
Xu, Ping
author_sort Bai, Zhigang
collection PubMed
description Accumulating evidence has shown that aberrant lncRNA expression plays an oncogenic or tumor-suppressive role in the tumorigenesis of laryngeal cancer. However, the prognostic roles of lncRNAs in laryngeal cancer recurrence are still poorly understood. In this study, we obtained lncRNA expression profiles of 109 patients with laryngeal cancer by mining previously published gene expression microarray data from the Gene Expression Omnibus (GEO) and identified two lncRNAs associated with laryngeal cancer recurrence in the training dataset by using Cox regression analysis. Then these two lncRNAs were combined to a two-lncRNA signature for identifying patients at high-risk of disease recurrence. By applying this two-lncRNA signature to the testing dataset, a clear separation was observed in the survival curves between patients with low- or high-risk scores, indicating good reproducibility of this two-lncRNA signature in predicting disease-free survival of laryngeal cancer. Further analysis revealed that the prognostic value of the two-lncRNA signature was independent of other clinical features, including age, stage and grade. Subsequent gene set enrichment analysis suggested that the two-lncRNA signature was more likely to involve with GPCRs downstream signaling pathway, potassium channel pathway and aurora-A pathway. Our study demonstrated that the two-lncRNA signature may be a novel potential biomarker for prognosis of laryngeal cancer and may provide novel insights into the molecular mechanism of laryngeal cancer.
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spelling pubmed-56425052017-10-18 A potential panel of two-long non-coding RNA signature to predict recurrence of patients with laryngeal cancer Bai, Zhigang Shi, Enhong Wang, Qiwei Dong, Zhouwei Xu, Ping Oncotarget Research Paper Accumulating evidence has shown that aberrant lncRNA expression plays an oncogenic or tumor-suppressive role in the tumorigenesis of laryngeal cancer. However, the prognostic roles of lncRNAs in laryngeal cancer recurrence are still poorly understood. In this study, we obtained lncRNA expression profiles of 109 patients with laryngeal cancer by mining previously published gene expression microarray data from the Gene Expression Omnibus (GEO) and identified two lncRNAs associated with laryngeal cancer recurrence in the training dataset by using Cox regression analysis. Then these two lncRNAs were combined to a two-lncRNA signature for identifying patients at high-risk of disease recurrence. By applying this two-lncRNA signature to the testing dataset, a clear separation was observed in the survival curves between patients with low- or high-risk scores, indicating good reproducibility of this two-lncRNA signature in predicting disease-free survival of laryngeal cancer. Further analysis revealed that the prognostic value of the two-lncRNA signature was independent of other clinical features, including age, stage and grade. Subsequent gene set enrichment analysis suggested that the two-lncRNA signature was more likely to involve with GPCRs downstream signaling pathway, potassium channel pathway and aurora-A pathway. Our study demonstrated that the two-lncRNA signature may be a novel potential biomarker for prognosis of laryngeal cancer and may provide novel insights into the molecular mechanism of laryngeal cancer. Impact Journals LLC 2017-06-28 /pmc/articles/PMC5642505/ /pubmed/29050230 http://dx.doi.org/10.18632/oncotarget.18751 Text en Copyright: © 2017 Bai et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/) 3.0 (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Bai, Zhigang
Shi, Enhong
Wang, Qiwei
Dong, Zhouwei
Xu, Ping
A potential panel of two-long non-coding RNA signature to predict recurrence of patients with laryngeal cancer
title A potential panel of two-long non-coding RNA signature to predict recurrence of patients with laryngeal cancer
title_full A potential panel of two-long non-coding RNA signature to predict recurrence of patients with laryngeal cancer
title_fullStr A potential panel of two-long non-coding RNA signature to predict recurrence of patients with laryngeal cancer
title_full_unstemmed A potential panel of two-long non-coding RNA signature to predict recurrence of patients with laryngeal cancer
title_short A potential panel of two-long non-coding RNA signature to predict recurrence of patients with laryngeal cancer
title_sort potential panel of two-long non-coding rna signature to predict recurrence of patients with laryngeal cancer
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5642505/
https://www.ncbi.nlm.nih.gov/pubmed/29050230
http://dx.doi.org/10.18632/oncotarget.18751
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