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Diffusion tensor image features predict IDH genotype in newly diagnosed WHO grade II/III gliomas

We hypothesized that machine learning analysis based on texture information from the preoperative MRI can predict IDH mutational status in newly diagnosed WHO grade II and III gliomas. This retrospective study included in total 79 consecutive patients with a newly diagnosed WHO grade II or III gliom...

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Autores principales: Eichinger, Paul, Alberts, Esther, Delbridge, Claire, Trebeschi, Stefano, Valentinitsch, Alexander, Bette, Stefanie, Huber, Thomas, Gempt, Jens, Meyer, Bernhard, Schlegel, Juergen, Zimmer, Claus, Kirschke, Jan S., Menze, Bjoern H., Wiestler, Benedikt
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5645407/
https://www.ncbi.nlm.nih.gov/pubmed/29042619
http://dx.doi.org/10.1038/s41598-017-13679-4
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author Eichinger, Paul
Alberts, Esther
Delbridge, Claire
Trebeschi, Stefano
Valentinitsch, Alexander
Bette, Stefanie
Huber, Thomas
Gempt, Jens
Meyer, Bernhard
Schlegel, Juergen
Zimmer, Claus
Kirschke, Jan S.
Menze, Bjoern H.
Wiestler, Benedikt
author_facet Eichinger, Paul
Alberts, Esther
Delbridge, Claire
Trebeschi, Stefano
Valentinitsch, Alexander
Bette, Stefanie
Huber, Thomas
Gempt, Jens
Meyer, Bernhard
Schlegel, Juergen
Zimmer, Claus
Kirschke, Jan S.
Menze, Bjoern H.
Wiestler, Benedikt
author_sort Eichinger, Paul
collection PubMed
description We hypothesized that machine learning analysis based on texture information from the preoperative MRI can predict IDH mutational status in newly diagnosed WHO grade II and III gliomas. This retrospective study included in total 79 consecutive patients with a newly diagnosed WHO grade II or III glioma. Local binary pattern texture features were generated from preoperative B0 and fractional anisotropy (FA) diffusion tensor imaging. Using a training set of 59 patients, a single hidden layer neural network was then trained on the texture features to predict IDH status. The model was validated based on the prediction accuracy calculated in a previously unseen set of 20 gliomas. Prediction accuracy of the generated model was 92% (54/59 cases; AUC = 0.921) in the training and 95% (19/20; AUC = 0.952) in the validation cohort. The ten most important features were comprised of tumor size and both B0 and FA texture information, underlining the joint contribution of imaging data to classification. Machine learning analysis of DTI texture information and tumor size reliably predicts IDH status in preoperative MRI of gliomas. Such information may increasingly support individualized surgical strategies, supplement pathological analysis and highlight the potential of radiogenomics.
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spelling pubmed-56454072017-10-26 Diffusion tensor image features predict IDH genotype in newly diagnosed WHO grade II/III gliomas Eichinger, Paul Alberts, Esther Delbridge, Claire Trebeschi, Stefano Valentinitsch, Alexander Bette, Stefanie Huber, Thomas Gempt, Jens Meyer, Bernhard Schlegel, Juergen Zimmer, Claus Kirschke, Jan S. Menze, Bjoern H. Wiestler, Benedikt Sci Rep Article We hypothesized that machine learning analysis based on texture information from the preoperative MRI can predict IDH mutational status in newly diagnosed WHO grade II and III gliomas. This retrospective study included in total 79 consecutive patients with a newly diagnosed WHO grade II or III glioma. Local binary pattern texture features were generated from preoperative B0 and fractional anisotropy (FA) diffusion tensor imaging. Using a training set of 59 patients, a single hidden layer neural network was then trained on the texture features to predict IDH status. The model was validated based on the prediction accuracy calculated in a previously unseen set of 20 gliomas. Prediction accuracy of the generated model was 92% (54/59 cases; AUC = 0.921) in the training and 95% (19/20; AUC = 0.952) in the validation cohort. The ten most important features were comprised of tumor size and both B0 and FA texture information, underlining the joint contribution of imaging data to classification. Machine learning analysis of DTI texture information and tumor size reliably predicts IDH status in preoperative MRI of gliomas. Such information may increasingly support individualized surgical strategies, supplement pathological analysis and highlight the potential of radiogenomics. Nature Publishing Group UK 2017-10-17 /pmc/articles/PMC5645407/ /pubmed/29042619 http://dx.doi.org/10.1038/s41598-017-13679-4 Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Eichinger, Paul
Alberts, Esther
Delbridge, Claire
Trebeschi, Stefano
Valentinitsch, Alexander
Bette, Stefanie
Huber, Thomas
Gempt, Jens
Meyer, Bernhard
Schlegel, Juergen
Zimmer, Claus
Kirschke, Jan S.
Menze, Bjoern H.
Wiestler, Benedikt
Diffusion tensor image features predict IDH genotype in newly diagnosed WHO grade II/III gliomas
title Diffusion tensor image features predict IDH genotype in newly diagnosed WHO grade II/III gliomas
title_full Diffusion tensor image features predict IDH genotype in newly diagnosed WHO grade II/III gliomas
title_fullStr Diffusion tensor image features predict IDH genotype in newly diagnosed WHO grade II/III gliomas
title_full_unstemmed Diffusion tensor image features predict IDH genotype in newly diagnosed WHO grade II/III gliomas
title_short Diffusion tensor image features predict IDH genotype in newly diagnosed WHO grade II/III gliomas
title_sort diffusion tensor image features predict idh genotype in newly diagnosed who grade ii/iii gliomas
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5645407/
https://www.ncbi.nlm.nih.gov/pubmed/29042619
http://dx.doi.org/10.1038/s41598-017-13679-4
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