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Diffusion tensor image features predict IDH genotype in newly diagnosed WHO grade II/III gliomas
We hypothesized that machine learning analysis based on texture information from the preoperative MRI can predict IDH mutational status in newly diagnosed WHO grade II and III gliomas. This retrospective study included in total 79 consecutive patients with a newly diagnosed WHO grade II or III gliom...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5645407/ https://www.ncbi.nlm.nih.gov/pubmed/29042619 http://dx.doi.org/10.1038/s41598-017-13679-4 |
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author | Eichinger, Paul Alberts, Esther Delbridge, Claire Trebeschi, Stefano Valentinitsch, Alexander Bette, Stefanie Huber, Thomas Gempt, Jens Meyer, Bernhard Schlegel, Juergen Zimmer, Claus Kirschke, Jan S. Menze, Bjoern H. Wiestler, Benedikt |
author_facet | Eichinger, Paul Alberts, Esther Delbridge, Claire Trebeschi, Stefano Valentinitsch, Alexander Bette, Stefanie Huber, Thomas Gempt, Jens Meyer, Bernhard Schlegel, Juergen Zimmer, Claus Kirschke, Jan S. Menze, Bjoern H. Wiestler, Benedikt |
author_sort | Eichinger, Paul |
collection | PubMed |
description | We hypothesized that machine learning analysis based on texture information from the preoperative MRI can predict IDH mutational status in newly diagnosed WHO grade II and III gliomas. This retrospective study included in total 79 consecutive patients with a newly diagnosed WHO grade II or III glioma. Local binary pattern texture features were generated from preoperative B0 and fractional anisotropy (FA) diffusion tensor imaging. Using a training set of 59 patients, a single hidden layer neural network was then trained on the texture features to predict IDH status. The model was validated based on the prediction accuracy calculated in a previously unseen set of 20 gliomas. Prediction accuracy of the generated model was 92% (54/59 cases; AUC = 0.921) in the training and 95% (19/20; AUC = 0.952) in the validation cohort. The ten most important features were comprised of tumor size and both B0 and FA texture information, underlining the joint contribution of imaging data to classification. Machine learning analysis of DTI texture information and tumor size reliably predicts IDH status in preoperative MRI of gliomas. Such information may increasingly support individualized surgical strategies, supplement pathological analysis and highlight the potential of radiogenomics. |
format | Online Article Text |
id | pubmed-5645407 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-56454072017-10-26 Diffusion tensor image features predict IDH genotype in newly diagnosed WHO grade II/III gliomas Eichinger, Paul Alberts, Esther Delbridge, Claire Trebeschi, Stefano Valentinitsch, Alexander Bette, Stefanie Huber, Thomas Gempt, Jens Meyer, Bernhard Schlegel, Juergen Zimmer, Claus Kirschke, Jan S. Menze, Bjoern H. Wiestler, Benedikt Sci Rep Article We hypothesized that machine learning analysis based on texture information from the preoperative MRI can predict IDH mutational status in newly diagnosed WHO grade II and III gliomas. This retrospective study included in total 79 consecutive patients with a newly diagnosed WHO grade II or III glioma. Local binary pattern texture features were generated from preoperative B0 and fractional anisotropy (FA) diffusion tensor imaging. Using a training set of 59 patients, a single hidden layer neural network was then trained on the texture features to predict IDH status. The model was validated based on the prediction accuracy calculated in a previously unseen set of 20 gliomas. Prediction accuracy of the generated model was 92% (54/59 cases; AUC = 0.921) in the training and 95% (19/20; AUC = 0.952) in the validation cohort. The ten most important features were comprised of tumor size and both B0 and FA texture information, underlining the joint contribution of imaging data to classification. Machine learning analysis of DTI texture information and tumor size reliably predicts IDH status in preoperative MRI of gliomas. Such information may increasingly support individualized surgical strategies, supplement pathological analysis and highlight the potential of radiogenomics. Nature Publishing Group UK 2017-10-17 /pmc/articles/PMC5645407/ /pubmed/29042619 http://dx.doi.org/10.1038/s41598-017-13679-4 Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Eichinger, Paul Alberts, Esther Delbridge, Claire Trebeschi, Stefano Valentinitsch, Alexander Bette, Stefanie Huber, Thomas Gempt, Jens Meyer, Bernhard Schlegel, Juergen Zimmer, Claus Kirschke, Jan S. Menze, Bjoern H. Wiestler, Benedikt Diffusion tensor image features predict IDH genotype in newly diagnosed WHO grade II/III gliomas |
title | Diffusion tensor image features predict IDH genotype in newly diagnosed WHO grade II/III gliomas |
title_full | Diffusion tensor image features predict IDH genotype in newly diagnosed WHO grade II/III gliomas |
title_fullStr | Diffusion tensor image features predict IDH genotype in newly diagnosed WHO grade II/III gliomas |
title_full_unstemmed | Diffusion tensor image features predict IDH genotype in newly diagnosed WHO grade II/III gliomas |
title_short | Diffusion tensor image features predict IDH genotype in newly diagnosed WHO grade II/III gliomas |
title_sort | diffusion tensor image features predict idh genotype in newly diagnosed who grade ii/iii gliomas |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5645407/ https://www.ncbi.nlm.nih.gov/pubmed/29042619 http://dx.doi.org/10.1038/s41598-017-13679-4 |
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