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Accounting for the complex hierarchical topology of EEG phase-based functional connectivity in network binarisation

Research into binary network analysis of brain function faces a methodological challenge in selecting an appropriate threshold to binarise edge weights. For EEG phase-based functional connectivity, we test the hypothesis that such binarisation should take into account the complex hierarchical struct...

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Detalles Bibliográficos
Autores principales: Smith, Keith, Abásolo, Daniel, Escudero, Javier
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5650149/
https://www.ncbi.nlm.nih.gov/pubmed/29053724
http://dx.doi.org/10.1371/journal.pone.0186164
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author Smith, Keith
Abásolo, Daniel
Escudero, Javier
author_facet Smith, Keith
Abásolo, Daniel
Escudero, Javier
author_sort Smith, Keith
collection PubMed
description Research into binary network analysis of brain function faces a methodological challenge in selecting an appropriate threshold to binarise edge weights. For EEG phase-based functional connectivity, we test the hypothesis that such binarisation should take into account the complex hierarchical structure found in functional connectivity. We explore the density range suitable for such structure and provide a comparison of state-of-the-art binarisation techniques, the recently proposed Cluster-Span Threshold (CST), minimum spanning trees, efficiency-cost optimisation and union of shortest path graphs, with arbitrary proportional thresholds and weighted networks. We test these techniques on weighted complex hierarchy models by contrasting model realisations with small parametric differences. We also test the robustness of these techniques to random and targeted topological attacks. We find that the CST performs consistenty well in state-of-the-art modelling of EEG network topology, robustness to topological network attacks, and in three real datasets, agreeing with our hypothesis of hierarchical complexity. This provides interesting new evidence into the relevance of considering a large number of edges in EEG functional connectivity research to provide informational density in the topology.
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spelling pubmed-56501492017-11-03 Accounting for the complex hierarchical topology of EEG phase-based functional connectivity in network binarisation Smith, Keith Abásolo, Daniel Escudero, Javier PLoS One Research Article Research into binary network analysis of brain function faces a methodological challenge in selecting an appropriate threshold to binarise edge weights. For EEG phase-based functional connectivity, we test the hypothesis that such binarisation should take into account the complex hierarchical structure found in functional connectivity. We explore the density range suitable for such structure and provide a comparison of state-of-the-art binarisation techniques, the recently proposed Cluster-Span Threshold (CST), minimum spanning trees, efficiency-cost optimisation and union of shortest path graphs, with arbitrary proportional thresholds and weighted networks. We test these techniques on weighted complex hierarchy models by contrasting model realisations with small parametric differences. We also test the robustness of these techniques to random and targeted topological attacks. We find that the CST performs consistenty well in state-of-the-art modelling of EEG network topology, robustness to topological network attacks, and in three real datasets, agreeing with our hypothesis of hierarchical complexity. This provides interesting new evidence into the relevance of considering a large number of edges in EEG functional connectivity research to provide informational density in the topology. Public Library of Science 2017-10-20 /pmc/articles/PMC5650149/ /pubmed/29053724 http://dx.doi.org/10.1371/journal.pone.0186164 Text en © 2017 Smith et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Smith, Keith
Abásolo, Daniel
Escudero, Javier
Accounting for the complex hierarchical topology of EEG phase-based functional connectivity in network binarisation
title Accounting for the complex hierarchical topology of EEG phase-based functional connectivity in network binarisation
title_full Accounting for the complex hierarchical topology of EEG phase-based functional connectivity in network binarisation
title_fullStr Accounting for the complex hierarchical topology of EEG phase-based functional connectivity in network binarisation
title_full_unstemmed Accounting for the complex hierarchical topology of EEG phase-based functional connectivity in network binarisation
title_short Accounting for the complex hierarchical topology of EEG phase-based functional connectivity in network binarisation
title_sort accounting for the complex hierarchical topology of eeg phase-based functional connectivity in network binarisation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5650149/
https://www.ncbi.nlm.nih.gov/pubmed/29053724
http://dx.doi.org/10.1371/journal.pone.0186164
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