Cargando…
Accounting for the complex hierarchical topology of EEG phase-based functional connectivity in network binarisation
Research into binary network analysis of brain function faces a methodological challenge in selecting an appropriate threshold to binarise edge weights. For EEG phase-based functional connectivity, we test the hypothesis that such binarisation should take into account the complex hierarchical struct...
Autores principales: | , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5650149/ https://www.ncbi.nlm.nih.gov/pubmed/29053724 http://dx.doi.org/10.1371/journal.pone.0186164 |
_version_ | 1783272652981403648 |
---|---|
author | Smith, Keith Abásolo, Daniel Escudero, Javier |
author_facet | Smith, Keith Abásolo, Daniel Escudero, Javier |
author_sort | Smith, Keith |
collection | PubMed |
description | Research into binary network analysis of brain function faces a methodological challenge in selecting an appropriate threshold to binarise edge weights. For EEG phase-based functional connectivity, we test the hypothesis that such binarisation should take into account the complex hierarchical structure found in functional connectivity. We explore the density range suitable for such structure and provide a comparison of state-of-the-art binarisation techniques, the recently proposed Cluster-Span Threshold (CST), minimum spanning trees, efficiency-cost optimisation and union of shortest path graphs, with arbitrary proportional thresholds and weighted networks. We test these techniques on weighted complex hierarchy models by contrasting model realisations with small parametric differences. We also test the robustness of these techniques to random and targeted topological attacks. We find that the CST performs consistenty well in state-of-the-art modelling of EEG network topology, robustness to topological network attacks, and in three real datasets, agreeing with our hypothesis of hierarchical complexity. This provides interesting new evidence into the relevance of considering a large number of edges in EEG functional connectivity research to provide informational density in the topology. |
format | Online Article Text |
id | pubmed-5650149 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-56501492017-11-03 Accounting for the complex hierarchical topology of EEG phase-based functional connectivity in network binarisation Smith, Keith Abásolo, Daniel Escudero, Javier PLoS One Research Article Research into binary network analysis of brain function faces a methodological challenge in selecting an appropriate threshold to binarise edge weights. For EEG phase-based functional connectivity, we test the hypothesis that such binarisation should take into account the complex hierarchical structure found in functional connectivity. We explore the density range suitable for such structure and provide a comparison of state-of-the-art binarisation techniques, the recently proposed Cluster-Span Threshold (CST), minimum spanning trees, efficiency-cost optimisation and union of shortest path graphs, with arbitrary proportional thresholds and weighted networks. We test these techniques on weighted complex hierarchy models by contrasting model realisations with small parametric differences. We also test the robustness of these techniques to random and targeted topological attacks. We find that the CST performs consistenty well in state-of-the-art modelling of EEG network topology, robustness to topological network attacks, and in three real datasets, agreeing with our hypothesis of hierarchical complexity. This provides interesting new evidence into the relevance of considering a large number of edges in EEG functional connectivity research to provide informational density in the topology. Public Library of Science 2017-10-20 /pmc/articles/PMC5650149/ /pubmed/29053724 http://dx.doi.org/10.1371/journal.pone.0186164 Text en © 2017 Smith et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Smith, Keith Abásolo, Daniel Escudero, Javier Accounting for the complex hierarchical topology of EEG phase-based functional connectivity in network binarisation |
title | Accounting for the complex hierarchical topology of EEG phase-based functional connectivity in network binarisation |
title_full | Accounting for the complex hierarchical topology of EEG phase-based functional connectivity in network binarisation |
title_fullStr | Accounting for the complex hierarchical topology of EEG phase-based functional connectivity in network binarisation |
title_full_unstemmed | Accounting for the complex hierarchical topology of EEG phase-based functional connectivity in network binarisation |
title_short | Accounting for the complex hierarchical topology of EEG phase-based functional connectivity in network binarisation |
title_sort | accounting for the complex hierarchical topology of eeg phase-based functional connectivity in network binarisation |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5650149/ https://www.ncbi.nlm.nih.gov/pubmed/29053724 http://dx.doi.org/10.1371/journal.pone.0186164 |
work_keys_str_mv | AT smithkeith accountingforthecomplexhierarchicaltopologyofeegphasebasedfunctionalconnectivityinnetworkbinarisation AT abasolodaniel accountingforthecomplexhierarchicaltopologyofeegphasebasedfunctionalconnectivityinnetworkbinarisation AT escuderojavier accountingforthecomplexhierarchicaltopologyofeegphasebasedfunctionalconnectivityinnetworkbinarisation |