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Comprehensive analysis of a novel four-lncRNA signature as a prognostic biomarker for human gastric cancer
Emerging evidence indicates that long non-coding RNAs (lncRNAs) play a crucial role in predicting survival for gastric cancer (GC) patients. This study aims to identify a lncRNA-related signature for evaluating the overall survival of 379 GC patients from The Cancer Genome Atlas (TCGA) database. The...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals LLC
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5650396/ https://www.ncbi.nlm.nih.gov/pubmed/29088841 http://dx.doi.org/10.18632/oncotarget.20496 |
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author | Miao, Yan Sui, Jing Xu, Si-Yi Liang, Ge-Yu Pu, Yue-Pu Yin, Li-Hong |
author_facet | Miao, Yan Sui, Jing Xu, Si-Yi Liang, Ge-Yu Pu, Yue-Pu Yin, Li-Hong |
author_sort | Miao, Yan |
collection | PubMed |
description | Emerging evidence indicates that long non-coding RNAs (lncRNAs) play a crucial role in predicting survival for gastric cancer (GC) patients. This study aims to identify a lncRNA-related signature for evaluating the overall survival of 379 GC patients from The Cancer Genome Atlas (TCGA) database. The associations between survival outcome and the expression of lncRNAs were evaluated by the univariate and multivariate Cox proportional hazards regression analyses. Four lncRNAs (LINC01018, LOC553137, MIR4435-2HG, and TTTY14) were identified as significantly correlated with overall survival. These four lncRNAs were gathered as a single prognostic signature. There was a significant positive correlation between GC patients with low-risk scores and overall survival (P = 0.001). Further analysis suggested that the prognostic value of this four-lncRNA signature was independent in clinical features. Gene set enrichment analysis found that these four lncRNAs were correlated with several molecular pathways of the tumor. Our study indicates that this novel lncRNA expression signature may be a useful biomarker of the prognosis for GC patients, based on bioinformatics analysis. |
format | Online Article Text |
id | pubmed-5650396 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Impact Journals LLC |
record_format | MEDLINE/PubMed |
spelling | pubmed-56503962017-10-30 Comprehensive analysis of a novel four-lncRNA signature as a prognostic biomarker for human gastric cancer Miao, Yan Sui, Jing Xu, Si-Yi Liang, Ge-Yu Pu, Yue-Pu Yin, Li-Hong Oncotarget Research Paper Emerging evidence indicates that long non-coding RNAs (lncRNAs) play a crucial role in predicting survival for gastric cancer (GC) patients. This study aims to identify a lncRNA-related signature for evaluating the overall survival of 379 GC patients from The Cancer Genome Atlas (TCGA) database. The associations between survival outcome and the expression of lncRNAs were evaluated by the univariate and multivariate Cox proportional hazards regression analyses. Four lncRNAs (LINC01018, LOC553137, MIR4435-2HG, and TTTY14) were identified as significantly correlated with overall survival. These four lncRNAs were gathered as a single prognostic signature. There was a significant positive correlation between GC patients with low-risk scores and overall survival (P = 0.001). Further analysis suggested that the prognostic value of this four-lncRNA signature was independent in clinical features. Gene set enrichment analysis found that these four lncRNAs were correlated with several molecular pathways of the tumor. Our study indicates that this novel lncRNA expression signature may be a useful biomarker of the prognosis for GC patients, based on bioinformatics analysis. Impact Journals LLC 2017-08-24 /pmc/articles/PMC5650396/ /pubmed/29088841 http://dx.doi.org/10.18632/oncotarget.20496 Text en Copyright: © 2017 Miao et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/) 3.0 (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Miao, Yan Sui, Jing Xu, Si-Yi Liang, Ge-Yu Pu, Yue-Pu Yin, Li-Hong Comprehensive analysis of a novel four-lncRNA signature as a prognostic biomarker for human gastric cancer |
title | Comprehensive analysis of a novel four-lncRNA signature as a prognostic biomarker for human gastric cancer |
title_full | Comprehensive analysis of a novel four-lncRNA signature as a prognostic biomarker for human gastric cancer |
title_fullStr | Comprehensive analysis of a novel four-lncRNA signature as a prognostic biomarker for human gastric cancer |
title_full_unstemmed | Comprehensive analysis of a novel four-lncRNA signature as a prognostic biomarker for human gastric cancer |
title_short | Comprehensive analysis of a novel four-lncRNA signature as a prognostic biomarker for human gastric cancer |
title_sort | comprehensive analysis of a novel four-lncrna signature as a prognostic biomarker for human gastric cancer |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5650396/ https://www.ncbi.nlm.nih.gov/pubmed/29088841 http://dx.doi.org/10.18632/oncotarget.20496 |
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