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Comprehensive analysis of a novel four-lncRNA signature as a prognostic biomarker for human gastric cancer

Emerging evidence indicates that long non-coding RNAs (lncRNAs) play a crucial role in predicting survival for gastric cancer (GC) patients. This study aims to identify a lncRNA-related signature for evaluating the overall survival of 379 GC patients from The Cancer Genome Atlas (TCGA) database. The...

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Autores principales: Miao, Yan, Sui, Jing, Xu, Si-Yi, Liang, Ge-Yu, Pu, Yue-Pu, Yin, Li-Hong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals LLC 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5650396/
https://www.ncbi.nlm.nih.gov/pubmed/29088841
http://dx.doi.org/10.18632/oncotarget.20496
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author Miao, Yan
Sui, Jing
Xu, Si-Yi
Liang, Ge-Yu
Pu, Yue-Pu
Yin, Li-Hong
author_facet Miao, Yan
Sui, Jing
Xu, Si-Yi
Liang, Ge-Yu
Pu, Yue-Pu
Yin, Li-Hong
author_sort Miao, Yan
collection PubMed
description Emerging evidence indicates that long non-coding RNAs (lncRNAs) play a crucial role in predicting survival for gastric cancer (GC) patients. This study aims to identify a lncRNA-related signature for evaluating the overall survival of 379 GC patients from The Cancer Genome Atlas (TCGA) database. The associations between survival outcome and the expression of lncRNAs were evaluated by the univariate and multivariate Cox proportional hazards regression analyses. Four lncRNAs (LINC01018, LOC553137, MIR4435-2HG, and TTTY14) were identified as significantly correlated with overall survival. These four lncRNAs were gathered as a single prognostic signature. There was a significant positive correlation between GC patients with low-risk scores and overall survival (P = 0.001). Further analysis suggested that the prognostic value of this four-lncRNA signature was independent in clinical features. Gene set enrichment analysis found that these four lncRNAs were correlated with several molecular pathways of the tumor. Our study indicates that this novel lncRNA expression signature may be a useful biomarker of the prognosis for GC patients, based on bioinformatics analysis.
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spelling pubmed-56503962017-10-30 Comprehensive analysis of a novel four-lncRNA signature as a prognostic biomarker for human gastric cancer Miao, Yan Sui, Jing Xu, Si-Yi Liang, Ge-Yu Pu, Yue-Pu Yin, Li-Hong Oncotarget Research Paper Emerging evidence indicates that long non-coding RNAs (lncRNAs) play a crucial role in predicting survival for gastric cancer (GC) patients. This study aims to identify a lncRNA-related signature for evaluating the overall survival of 379 GC patients from The Cancer Genome Atlas (TCGA) database. The associations between survival outcome and the expression of lncRNAs were evaluated by the univariate and multivariate Cox proportional hazards regression analyses. Four lncRNAs (LINC01018, LOC553137, MIR4435-2HG, and TTTY14) were identified as significantly correlated with overall survival. These four lncRNAs were gathered as a single prognostic signature. There was a significant positive correlation between GC patients with low-risk scores and overall survival (P = 0.001). Further analysis suggested that the prognostic value of this four-lncRNA signature was independent in clinical features. Gene set enrichment analysis found that these four lncRNAs were correlated with several molecular pathways of the tumor. Our study indicates that this novel lncRNA expression signature may be a useful biomarker of the prognosis for GC patients, based on bioinformatics analysis. Impact Journals LLC 2017-08-24 /pmc/articles/PMC5650396/ /pubmed/29088841 http://dx.doi.org/10.18632/oncotarget.20496 Text en Copyright: © 2017 Miao et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/) 3.0 (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Miao, Yan
Sui, Jing
Xu, Si-Yi
Liang, Ge-Yu
Pu, Yue-Pu
Yin, Li-Hong
Comprehensive analysis of a novel four-lncRNA signature as a prognostic biomarker for human gastric cancer
title Comprehensive analysis of a novel four-lncRNA signature as a prognostic biomarker for human gastric cancer
title_full Comprehensive analysis of a novel four-lncRNA signature as a prognostic biomarker for human gastric cancer
title_fullStr Comprehensive analysis of a novel four-lncRNA signature as a prognostic biomarker for human gastric cancer
title_full_unstemmed Comprehensive analysis of a novel four-lncRNA signature as a prognostic biomarker for human gastric cancer
title_short Comprehensive analysis of a novel four-lncRNA signature as a prognostic biomarker for human gastric cancer
title_sort comprehensive analysis of a novel four-lncrna signature as a prognostic biomarker for human gastric cancer
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5650396/
https://www.ncbi.nlm.nih.gov/pubmed/29088841
http://dx.doi.org/10.18632/oncotarget.20496
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