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Nucleotide sequence and results of test of adaptive evolution in the α-globin gene of octodontoid rodents

The data presented in this article are related to the research article entitled “Molecular adaptive convergence in the α-globin gene in subterranean octodontid rodents” (Tomasco et al., 2017) [1]. This article shows the nucleotide sequences of α-globin subunit gene of hemoglobin of several South Ame...

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Autores principales: Tomasco, I.H., Boullosa, N., Hoffmann, F.G., Lessa, E.P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5650648/
https://www.ncbi.nlm.nih.gov/pubmed/29085872
http://dx.doi.org/10.1016/j.dib.2017.09.017
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author Tomasco, I.H.
Boullosa, N.
Hoffmann, F.G.
Lessa, E.P.
author_facet Tomasco, I.H.
Boullosa, N.
Hoffmann, F.G.
Lessa, E.P.
author_sort Tomasco, I.H.
collection PubMed
description The data presented in this article are related to the research article entitled “Molecular adaptive convergence in the α-globin gene in subterranean octodontid rodents” (Tomasco et al., 2017) [1]. This article shows the nucleotide sequences of α-globin subunit gene of hemoglobin of several South American caviomorph rodents, including subterranean and fossorial species. These sequences are deposited in Genbank, with accession numbers ranging from MF169881 to MF169898. Of a total of 429 nucleotides analyzed (143 codons), 100 variable sites and 43 amino acid replacements were reported. In this article we also show the results of TreeSaap (Woolley et al., 2003) [2] and MEME (Murrell et al., 2012) [3], that identified some replacement changes as interesting for future studies of adaptive evolution in this large rodent radiation.
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spelling pubmed-56506482017-10-30 Nucleotide sequence and results of test of adaptive evolution in the α-globin gene of octodontoid rodents Tomasco, I.H. Boullosa, N. Hoffmann, F.G. Lessa, E.P. Data Brief Genetics, Genomics and Molecular Biology The data presented in this article are related to the research article entitled “Molecular adaptive convergence in the α-globin gene in subterranean octodontid rodents” (Tomasco et al., 2017) [1]. This article shows the nucleotide sequences of α-globin subunit gene of hemoglobin of several South American caviomorph rodents, including subterranean and fossorial species. These sequences are deposited in Genbank, with accession numbers ranging from MF169881 to MF169898. Of a total of 429 nucleotides analyzed (143 codons), 100 variable sites and 43 amino acid replacements were reported. In this article we also show the results of TreeSaap (Woolley et al., 2003) [2] and MEME (Murrell et al., 2012) [3], that identified some replacement changes as interesting for future studies of adaptive evolution in this large rodent radiation. Elsevier 2017-09-18 /pmc/articles/PMC5650648/ /pubmed/29085872 http://dx.doi.org/10.1016/j.dib.2017.09.017 Text en © 2017 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Genetics, Genomics and Molecular Biology
Tomasco, I.H.
Boullosa, N.
Hoffmann, F.G.
Lessa, E.P.
Nucleotide sequence and results of test of adaptive evolution in the α-globin gene of octodontoid rodents
title Nucleotide sequence and results of test of adaptive evolution in the α-globin gene of octodontoid rodents
title_full Nucleotide sequence and results of test of adaptive evolution in the α-globin gene of octodontoid rodents
title_fullStr Nucleotide sequence and results of test of adaptive evolution in the α-globin gene of octodontoid rodents
title_full_unstemmed Nucleotide sequence and results of test of adaptive evolution in the α-globin gene of octodontoid rodents
title_short Nucleotide sequence and results of test of adaptive evolution in the α-globin gene of octodontoid rodents
title_sort nucleotide sequence and results of test of adaptive evolution in the α-globin gene of octodontoid rodents
topic Genetics, Genomics and Molecular Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5650648/
https://www.ncbi.nlm.nih.gov/pubmed/29085872
http://dx.doi.org/10.1016/j.dib.2017.09.017
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