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Racial disparities in patient survival and tumor mutation burden, and the association between tumor mutation burden and cancer incidence rate

The causes underlying racial disparities in cancer are multifactorial. In addition to socioeconomic issues, biological factors may contribute to these inequities, especially in disease incidence and patient survival. To date, there have been few studies that relate the disparities in these aspects t...

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Autores principales: Zhang, Wensheng, Edwards, Andrea, Flemington, Erik K., Zhang, Kun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5651797/
https://www.ncbi.nlm.nih.gov/pubmed/29057889
http://dx.doi.org/10.1038/s41598-017-13091-y
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author Zhang, Wensheng
Edwards, Andrea
Flemington, Erik K.
Zhang, Kun
author_facet Zhang, Wensheng
Edwards, Andrea
Flemington, Erik K.
Zhang, Kun
author_sort Zhang, Wensheng
collection PubMed
description The causes underlying racial disparities in cancer are multifactorial. In addition to socioeconomic issues, biological factors may contribute to these inequities, especially in disease incidence and patient survival. To date, there have been few studies that relate the disparities in these aspects to genetic aberrations. In this work, we studied the impacts of race on the patient survival and tumor mutation burden using the data released by the Cancer Genome Atlas (TCGA). The potential relationship between mutation burden and disease incidence is further inferred by an integrative analysis of TCGA data and the data from the Surveillance, Epidemiology, and End Results (SEER) Program. The results show that disparities are present (p < 0.05) in patient survival of five cancers, such as head and neck squamous cell carcinoma. The numbers of tumor driver mutations are differentiated (p < 0.05) over the racial groups in five cancers, such as lung adenocarcinoma. By treating a specific cancer type and a racial group as an “experimental unit”, driver mutation numbers demonstrate a significant (r = 0.46, p < 0.002) positive correlation with cancer incidence rates, especially when the five cancers with mutational disparities are exclusively focused (r = 0.88, p < 0.00002). These results enrich our understanding of racial disparities in cancer and carcinogenic process.
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spelling pubmed-56517972017-10-26 Racial disparities in patient survival and tumor mutation burden, and the association between tumor mutation burden and cancer incidence rate Zhang, Wensheng Edwards, Andrea Flemington, Erik K. Zhang, Kun Sci Rep Article The causes underlying racial disparities in cancer are multifactorial. In addition to socioeconomic issues, biological factors may contribute to these inequities, especially in disease incidence and patient survival. To date, there have been few studies that relate the disparities in these aspects to genetic aberrations. In this work, we studied the impacts of race on the patient survival and tumor mutation burden using the data released by the Cancer Genome Atlas (TCGA). The potential relationship between mutation burden and disease incidence is further inferred by an integrative analysis of TCGA data and the data from the Surveillance, Epidemiology, and End Results (SEER) Program. The results show that disparities are present (p < 0.05) in patient survival of five cancers, such as head and neck squamous cell carcinoma. The numbers of tumor driver mutations are differentiated (p < 0.05) over the racial groups in five cancers, such as lung adenocarcinoma. By treating a specific cancer type and a racial group as an “experimental unit”, driver mutation numbers demonstrate a significant (r = 0.46, p < 0.002) positive correlation with cancer incidence rates, especially when the five cancers with mutational disparities are exclusively focused (r = 0.88, p < 0.00002). These results enrich our understanding of racial disparities in cancer and carcinogenic process. Nature Publishing Group UK 2017-10-20 /pmc/articles/PMC5651797/ /pubmed/29057889 http://dx.doi.org/10.1038/s41598-017-13091-y Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Zhang, Wensheng
Edwards, Andrea
Flemington, Erik K.
Zhang, Kun
Racial disparities in patient survival and tumor mutation burden, and the association between tumor mutation burden and cancer incidence rate
title Racial disparities in patient survival and tumor mutation burden, and the association between tumor mutation burden and cancer incidence rate
title_full Racial disparities in patient survival and tumor mutation burden, and the association between tumor mutation burden and cancer incidence rate
title_fullStr Racial disparities in patient survival and tumor mutation burden, and the association between tumor mutation burden and cancer incidence rate
title_full_unstemmed Racial disparities in patient survival and tumor mutation burden, and the association between tumor mutation burden and cancer incidence rate
title_short Racial disparities in patient survival and tumor mutation burden, and the association between tumor mutation burden and cancer incidence rate
title_sort racial disparities in patient survival and tumor mutation burden, and the association between tumor mutation burden and cancer incidence rate
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5651797/
https://www.ncbi.nlm.nih.gov/pubmed/29057889
http://dx.doi.org/10.1038/s41598-017-13091-y
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