Cargando…

The interaction effect of rs4077515 and rs17019602 increases the susceptibility to IgA nephropathy

BACKGROUND: Immunoglobulin A nephropathy (IgAN), the most common form of primary glomerular diseases worldwide, is a complex multifactorial disease. Previous genome wide association studies (GWAS) reported that variants CARD9 and VAV3 genes were associated with immunoregulation and susceptibility to...

Descripción completa

Detalles Bibliográficos
Autores principales: Wu, Changwei, Li, Guisen, Wang, Li
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals LLC 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5652722/
https://www.ncbi.nlm.nih.gov/pubmed/29100328
http://dx.doi.org/10.18632/oncotarget.20401
_version_ 1783273112574361600
author Wu, Changwei
Li, Guisen
Wang, Li
author_facet Wu, Changwei
Li, Guisen
Wang, Li
author_sort Wu, Changwei
collection PubMed
description BACKGROUND: Immunoglobulin A nephropathy (IgAN), the most common form of primary glomerular diseases worldwide, is a complex multifactorial disease. Previous genome wide association studies (GWAS) reported that variants CARD9 and VAV3 genes were associated with immunoregulation and susceptibility to IgAN. In this study, we further validated the associations and explored the interaction effect of rs4077515 and rs17019602 in IgAN patients. RESULTS: There was no significant correlation between the two variants and IgAN (P > 0.05). The gene-gene analysis showed that rs4077515 and rs17019602 had interaction effect on the susceptibility to IgAN. For additive interaction, the CT or TT of rs4077515 and GG of 17019602 genotype combination conferred a 2.56-fold risk of IgAN reference to CC of 4077515 and AA of 17019602 (OR = 2.56, 95% CI: 0.98–6.69, P = 0.049). In our study, clinical data was available for 543 patients. In comparison, neither rs4077515 nor rs17019602 showed significant association between genotype distribution and clinical parameters in IgAN patients (P > 0.05). MATERIALS AND METHODS: The case-control study included 586 patients with IgAN and 606 healthy controls. Variant rs4077515 of CARD9 gene and rs17019602 of VAV3 gene were genotyped by the ABI TaqMan probe assay. CONCLUSIONS: The interaction effect of the variants of CARD9 and VAV3 genes increases the susceptibility to IgAN.
format Online
Article
Text
id pubmed-5652722
institution National Center for Biotechnology Information
language English
publishDate 2017
publisher Impact Journals LLC
record_format MEDLINE/PubMed
spelling pubmed-56527222017-11-02 The interaction effect of rs4077515 and rs17019602 increases the susceptibility to IgA nephropathy Wu, Changwei Li, Guisen Wang, Li Oncotarget Research Paper BACKGROUND: Immunoglobulin A nephropathy (IgAN), the most common form of primary glomerular diseases worldwide, is a complex multifactorial disease. Previous genome wide association studies (GWAS) reported that variants CARD9 and VAV3 genes were associated with immunoregulation and susceptibility to IgAN. In this study, we further validated the associations and explored the interaction effect of rs4077515 and rs17019602 in IgAN patients. RESULTS: There was no significant correlation between the two variants and IgAN (P > 0.05). The gene-gene analysis showed that rs4077515 and rs17019602 had interaction effect on the susceptibility to IgAN. For additive interaction, the CT or TT of rs4077515 and GG of 17019602 genotype combination conferred a 2.56-fold risk of IgAN reference to CC of 4077515 and AA of 17019602 (OR = 2.56, 95% CI: 0.98–6.69, P = 0.049). In our study, clinical data was available for 543 patients. In comparison, neither rs4077515 nor rs17019602 showed significant association between genotype distribution and clinical parameters in IgAN patients (P > 0.05). MATERIALS AND METHODS: The case-control study included 586 patients with IgAN and 606 healthy controls. Variant rs4077515 of CARD9 gene and rs17019602 of VAV3 gene were genotyped by the ABI TaqMan probe assay. CONCLUSIONS: The interaction effect of the variants of CARD9 and VAV3 genes increases the susceptibility to IgAN. Impact Journals LLC 2017-08-23 /pmc/articles/PMC5652722/ /pubmed/29100328 http://dx.doi.org/10.18632/oncotarget.20401 Text en Copyright: © 2017 Wu et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License 3.0 (http://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Wu, Changwei
Li, Guisen
Wang, Li
The interaction effect of rs4077515 and rs17019602 increases the susceptibility to IgA nephropathy
title The interaction effect of rs4077515 and rs17019602 increases the susceptibility to IgA nephropathy
title_full The interaction effect of rs4077515 and rs17019602 increases the susceptibility to IgA nephropathy
title_fullStr The interaction effect of rs4077515 and rs17019602 increases the susceptibility to IgA nephropathy
title_full_unstemmed The interaction effect of rs4077515 and rs17019602 increases the susceptibility to IgA nephropathy
title_short The interaction effect of rs4077515 and rs17019602 increases the susceptibility to IgA nephropathy
title_sort interaction effect of rs4077515 and rs17019602 increases the susceptibility to iga nephropathy
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5652722/
https://www.ncbi.nlm.nih.gov/pubmed/29100328
http://dx.doi.org/10.18632/oncotarget.20401
work_keys_str_mv AT wuchangwei theinteractioneffectofrs4077515andrs17019602increasesthesusceptibilitytoiganephropathy
AT liguisen theinteractioneffectofrs4077515andrs17019602increasesthesusceptibilitytoiganephropathy
AT wangli theinteractioneffectofrs4077515andrs17019602increasesthesusceptibilitytoiganephropathy
AT wuchangwei interactioneffectofrs4077515andrs17019602increasesthesusceptibilitytoiganephropathy
AT liguisen interactioneffectofrs4077515andrs17019602increasesthesusceptibilitytoiganephropathy
AT wangli interactioneffectofrs4077515andrs17019602increasesthesusceptibilitytoiganephropathy