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Formation of the chaperonin complex studied by 2D NMR spectroscopy

We studied the interaction between GroES and a single-ring mutant (SR1) of GroEL by the NMR titration of (15)N-labeled GroES with SR1 at three different temperatures (20, 25 and 30°C) in the presence of 3 mM ADP in 100 mM KCl and 10 mM MgCl(2) at pH 7.5. We used SR1 instead of wild-type double-ring...

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Autores principales: Takenaka, Toshio, Nakamura, Takashi, Yanaka, Saeko, Yagi-Utsumi, Maho, Chandak, Mahesh S., Takahashi, Kazunobu, Paul, Subhankar, Makabe, Koki, Arai, Munehito, Kato, Koichi, Kuwajima, Kunihiro
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5653362/
https://www.ncbi.nlm.nih.gov/pubmed/29059240
http://dx.doi.org/10.1371/journal.pone.0187022
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author Takenaka, Toshio
Nakamura, Takashi
Yanaka, Saeko
Yagi-Utsumi, Maho
Chandak, Mahesh S.
Takahashi, Kazunobu
Paul, Subhankar
Makabe, Koki
Arai, Munehito
Kato, Koichi
Kuwajima, Kunihiro
author_facet Takenaka, Toshio
Nakamura, Takashi
Yanaka, Saeko
Yagi-Utsumi, Maho
Chandak, Mahesh S.
Takahashi, Kazunobu
Paul, Subhankar
Makabe, Koki
Arai, Munehito
Kato, Koichi
Kuwajima, Kunihiro
author_sort Takenaka, Toshio
collection PubMed
description We studied the interaction between GroES and a single-ring mutant (SR1) of GroEL by the NMR titration of (15)N-labeled GroES with SR1 at three different temperatures (20, 25 and 30°C) in the presence of 3 mM ADP in 100 mM KCl and 10 mM MgCl(2) at pH 7.5. We used SR1 instead of wild-type double-ring GroEL to precisely control the stoichiometry of the GroES binding to be 1:1 ([SR1]:[GroES]). Native heptameric GroES was very flexible, showing well resolved cross peaks of the residues in a mobile loop segment (residue 17–34) and at the top of a roof hairpin (Asn51) in the heteronuclear single quantum coherence spectra. The binding of SR1 to GroES caused the cross peaks to disappear simultaneously, and hence it occurred in a single-step cooperative manner with significant immobilization of the whole GroES structure. The binding was thus entropic with a positive entropy change (219 J/mol/K) and a positive enthalpy change (35 kJ/mol), and the binding constant was estimated at 1.9×10(5) M(−1) at 25°C. The NMR titration in 3 mM ATP also indicated that the binding constant between GroES and SR1 increased more than tenfold as compared with the binding constant in 3 mM ADP. These results will be discussed in relation to the structure and mechanisms of the chaperonin GroEL/GroES complex.
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spelling pubmed-56533622017-11-08 Formation of the chaperonin complex studied by 2D NMR spectroscopy Takenaka, Toshio Nakamura, Takashi Yanaka, Saeko Yagi-Utsumi, Maho Chandak, Mahesh S. Takahashi, Kazunobu Paul, Subhankar Makabe, Koki Arai, Munehito Kato, Koichi Kuwajima, Kunihiro PLoS One Research Article We studied the interaction between GroES and a single-ring mutant (SR1) of GroEL by the NMR titration of (15)N-labeled GroES with SR1 at three different temperatures (20, 25 and 30°C) in the presence of 3 mM ADP in 100 mM KCl and 10 mM MgCl(2) at pH 7.5. We used SR1 instead of wild-type double-ring GroEL to precisely control the stoichiometry of the GroES binding to be 1:1 ([SR1]:[GroES]). Native heptameric GroES was very flexible, showing well resolved cross peaks of the residues in a mobile loop segment (residue 17–34) and at the top of a roof hairpin (Asn51) in the heteronuclear single quantum coherence spectra. The binding of SR1 to GroES caused the cross peaks to disappear simultaneously, and hence it occurred in a single-step cooperative manner with significant immobilization of the whole GroES structure. The binding was thus entropic with a positive entropy change (219 J/mol/K) and a positive enthalpy change (35 kJ/mol), and the binding constant was estimated at 1.9×10(5) M(−1) at 25°C. The NMR titration in 3 mM ATP also indicated that the binding constant between GroES and SR1 increased more than tenfold as compared with the binding constant in 3 mM ADP. These results will be discussed in relation to the structure and mechanisms of the chaperonin GroEL/GroES complex. Public Library of Science 2017-10-23 /pmc/articles/PMC5653362/ /pubmed/29059240 http://dx.doi.org/10.1371/journal.pone.0187022 Text en © 2017 Takenaka et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Takenaka, Toshio
Nakamura, Takashi
Yanaka, Saeko
Yagi-Utsumi, Maho
Chandak, Mahesh S.
Takahashi, Kazunobu
Paul, Subhankar
Makabe, Koki
Arai, Munehito
Kato, Koichi
Kuwajima, Kunihiro
Formation of the chaperonin complex studied by 2D NMR spectroscopy
title Formation of the chaperonin complex studied by 2D NMR spectroscopy
title_full Formation of the chaperonin complex studied by 2D NMR spectroscopy
title_fullStr Formation of the chaperonin complex studied by 2D NMR spectroscopy
title_full_unstemmed Formation of the chaperonin complex studied by 2D NMR spectroscopy
title_short Formation of the chaperonin complex studied by 2D NMR spectroscopy
title_sort formation of the chaperonin complex studied by 2d nmr spectroscopy
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5653362/
https://www.ncbi.nlm.nih.gov/pubmed/29059240
http://dx.doi.org/10.1371/journal.pone.0187022
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