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Highly heterogeneous diazotroph communities in the Kuroshio Current and the Tokara Strait, Japan
In this study, we used 454-pyrosequencing to report the highly diverse diazotroph communities in the Kuroshio and its adjacent waters along a transect across the Tokara Strait, Japan. Terrestrial input from the islands resulted in a highly heterogeneous diazotroph community within a relatively small...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5653367/ https://www.ncbi.nlm.nih.gov/pubmed/29059241 http://dx.doi.org/10.1371/journal.pone.0186875 |
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author | Cheung, Shunyan Suzuki, Koji Saito, Hiroaki Umezawa, Yu Xia, Xiaomin Liu, Hongbin |
author_facet | Cheung, Shunyan Suzuki, Koji Saito, Hiroaki Umezawa, Yu Xia, Xiaomin Liu, Hongbin |
author_sort | Cheung, Shunyan |
collection | PubMed |
description | In this study, we used 454-pyrosequencing to report the highly diverse diazotroph communities in the Kuroshio and its adjacent waters along a transect across the Tokara Strait, Japan. Terrestrial input from the islands resulted in a highly heterogeneous diazotroph community within a relatively small geographic region, which was presumably caused by the remarkably different responses of UCYN-A2, UCYN-C and Trichodesmium to the steep environmental gradient. On the other hand, most major cyanobacterial OTUs found in this study were also detected in an unpublished dataset from the upstream Kuroshio, which suggests transportation of diazotrophs by the Kuroshio in large geographic scale. A significant amount of UCYN-C was found in the Kuroshio and offshore stations, suggesting the importance of this potentially overlooked group in the western North Pacific Ocean (WNPO). Moreover, a novel sublineage of UCYN-B was defined, which was predominant in an oligotrophic water sample; and it was also found to be widely distributed in oceanic waters. In addition, the apparent increase in relative abundance of UCYN-A2 from offshore to near-shore water provides evidence for the earlier and under-debating view that UCYN-A2 prefers coastal conditions. Our report provides new knowledge for understanding the phylogeny and ecology of unicellular cyanobacterial diazotrophs in WNPO. |
format | Online Article Text |
id | pubmed-5653367 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-56533672017-11-08 Highly heterogeneous diazotroph communities in the Kuroshio Current and the Tokara Strait, Japan Cheung, Shunyan Suzuki, Koji Saito, Hiroaki Umezawa, Yu Xia, Xiaomin Liu, Hongbin PLoS One Research Article In this study, we used 454-pyrosequencing to report the highly diverse diazotroph communities in the Kuroshio and its adjacent waters along a transect across the Tokara Strait, Japan. Terrestrial input from the islands resulted in a highly heterogeneous diazotroph community within a relatively small geographic region, which was presumably caused by the remarkably different responses of UCYN-A2, UCYN-C and Trichodesmium to the steep environmental gradient. On the other hand, most major cyanobacterial OTUs found in this study were also detected in an unpublished dataset from the upstream Kuroshio, which suggests transportation of diazotrophs by the Kuroshio in large geographic scale. A significant amount of UCYN-C was found in the Kuroshio and offshore stations, suggesting the importance of this potentially overlooked group in the western North Pacific Ocean (WNPO). Moreover, a novel sublineage of UCYN-B was defined, which was predominant in an oligotrophic water sample; and it was also found to be widely distributed in oceanic waters. In addition, the apparent increase in relative abundance of UCYN-A2 from offshore to near-shore water provides evidence for the earlier and under-debating view that UCYN-A2 prefers coastal conditions. Our report provides new knowledge for understanding the phylogeny and ecology of unicellular cyanobacterial diazotrophs in WNPO. Public Library of Science 2017-10-23 /pmc/articles/PMC5653367/ /pubmed/29059241 http://dx.doi.org/10.1371/journal.pone.0186875 Text en © 2017 Cheung et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Cheung, Shunyan Suzuki, Koji Saito, Hiroaki Umezawa, Yu Xia, Xiaomin Liu, Hongbin Highly heterogeneous diazotroph communities in the Kuroshio Current and the Tokara Strait, Japan |
title | Highly heterogeneous diazotroph communities in the Kuroshio Current and the Tokara Strait, Japan |
title_full | Highly heterogeneous diazotroph communities in the Kuroshio Current and the Tokara Strait, Japan |
title_fullStr | Highly heterogeneous diazotroph communities in the Kuroshio Current and the Tokara Strait, Japan |
title_full_unstemmed | Highly heterogeneous diazotroph communities in the Kuroshio Current and the Tokara Strait, Japan |
title_short | Highly heterogeneous diazotroph communities in the Kuroshio Current and the Tokara Strait, Japan |
title_sort | highly heterogeneous diazotroph communities in the kuroshio current and the tokara strait, japan |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5653367/ https://www.ncbi.nlm.nih.gov/pubmed/29059241 http://dx.doi.org/10.1371/journal.pone.0186875 |
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