Cargando…

Highly heterogeneous diazotroph communities in the Kuroshio Current and the Tokara Strait, Japan

In this study, we used 454-pyrosequencing to report the highly diverse diazotroph communities in the Kuroshio and its adjacent waters along a transect across the Tokara Strait, Japan. Terrestrial input from the islands resulted in a highly heterogeneous diazotroph community within a relatively small...

Descripción completa

Detalles Bibliográficos
Autores principales: Cheung, Shunyan, Suzuki, Koji, Saito, Hiroaki, Umezawa, Yu, Xia, Xiaomin, Liu, Hongbin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5653367/
https://www.ncbi.nlm.nih.gov/pubmed/29059241
http://dx.doi.org/10.1371/journal.pone.0186875
_version_ 1783273219377070080
author Cheung, Shunyan
Suzuki, Koji
Saito, Hiroaki
Umezawa, Yu
Xia, Xiaomin
Liu, Hongbin
author_facet Cheung, Shunyan
Suzuki, Koji
Saito, Hiroaki
Umezawa, Yu
Xia, Xiaomin
Liu, Hongbin
author_sort Cheung, Shunyan
collection PubMed
description In this study, we used 454-pyrosequencing to report the highly diverse diazotroph communities in the Kuroshio and its adjacent waters along a transect across the Tokara Strait, Japan. Terrestrial input from the islands resulted in a highly heterogeneous diazotroph community within a relatively small geographic region, which was presumably caused by the remarkably different responses of UCYN-A2, UCYN-C and Trichodesmium to the steep environmental gradient. On the other hand, most major cyanobacterial OTUs found in this study were also detected in an unpublished dataset from the upstream Kuroshio, which suggests transportation of diazotrophs by the Kuroshio in large geographic scale. A significant amount of UCYN-C was found in the Kuroshio and offshore stations, suggesting the importance of this potentially overlooked group in the western North Pacific Ocean (WNPO). Moreover, a novel sublineage of UCYN-B was defined, which was predominant in an oligotrophic water sample; and it was also found to be widely distributed in oceanic waters. In addition, the apparent increase in relative abundance of UCYN-A2 from offshore to near-shore water provides evidence for the earlier and under-debating view that UCYN-A2 prefers coastal conditions. Our report provides new knowledge for understanding the phylogeny and ecology of unicellular cyanobacterial diazotrophs in WNPO.
format Online
Article
Text
id pubmed-5653367
institution National Center for Biotechnology Information
language English
publishDate 2017
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-56533672017-11-08 Highly heterogeneous diazotroph communities in the Kuroshio Current and the Tokara Strait, Japan Cheung, Shunyan Suzuki, Koji Saito, Hiroaki Umezawa, Yu Xia, Xiaomin Liu, Hongbin PLoS One Research Article In this study, we used 454-pyrosequencing to report the highly diverse diazotroph communities in the Kuroshio and its adjacent waters along a transect across the Tokara Strait, Japan. Terrestrial input from the islands resulted in a highly heterogeneous diazotroph community within a relatively small geographic region, which was presumably caused by the remarkably different responses of UCYN-A2, UCYN-C and Trichodesmium to the steep environmental gradient. On the other hand, most major cyanobacterial OTUs found in this study were also detected in an unpublished dataset from the upstream Kuroshio, which suggests transportation of diazotrophs by the Kuroshio in large geographic scale. A significant amount of UCYN-C was found in the Kuroshio and offshore stations, suggesting the importance of this potentially overlooked group in the western North Pacific Ocean (WNPO). Moreover, a novel sublineage of UCYN-B was defined, which was predominant in an oligotrophic water sample; and it was also found to be widely distributed in oceanic waters. In addition, the apparent increase in relative abundance of UCYN-A2 from offshore to near-shore water provides evidence for the earlier and under-debating view that UCYN-A2 prefers coastal conditions. Our report provides new knowledge for understanding the phylogeny and ecology of unicellular cyanobacterial diazotrophs in WNPO. Public Library of Science 2017-10-23 /pmc/articles/PMC5653367/ /pubmed/29059241 http://dx.doi.org/10.1371/journal.pone.0186875 Text en © 2017 Cheung et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Cheung, Shunyan
Suzuki, Koji
Saito, Hiroaki
Umezawa, Yu
Xia, Xiaomin
Liu, Hongbin
Highly heterogeneous diazotroph communities in the Kuroshio Current and the Tokara Strait, Japan
title Highly heterogeneous diazotroph communities in the Kuroshio Current and the Tokara Strait, Japan
title_full Highly heterogeneous diazotroph communities in the Kuroshio Current and the Tokara Strait, Japan
title_fullStr Highly heterogeneous diazotroph communities in the Kuroshio Current and the Tokara Strait, Japan
title_full_unstemmed Highly heterogeneous diazotroph communities in the Kuroshio Current and the Tokara Strait, Japan
title_short Highly heterogeneous diazotroph communities in the Kuroshio Current and the Tokara Strait, Japan
title_sort highly heterogeneous diazotroph communities in the kuroshio current and the tokara strait, japan
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5653367/
https://www.ncbi.nlm.nih.gov/pubmed/29059241
http://dx.doi.org/10.1371/journal.pone.0186875
work_keys_str_mv AT cheungshunyan highlyheterogeneousdiazotrophcommunitiesinthekuroshiocurrentandthetokarastraitjapan
AT suzukikoji highlyheterogeneousdiazotrophcommunitiesinthekuroshiocurrentandthetokarastraitjapan
AT saitohiroaki highlyheterogeneousdiazotrophcommunitiesinthekuroshiocurrentandthetokarastraitjapan
AT umezawayu highlyheterogeneousdiazotrophcommunitiesinthekuroshiocurrentandthetokarastraitjapan
AT xiaxiaomin highlyheterogeneousdiazotrophcommunitiesinthekuroshiocurrentandthetokarastraitjapan
AT liuhongbin highlyheterogeneousdiazotrophcommunitiesinthekuroshiocurrentandthetokarastraitjapan