Cargando…
Image-based model of the spectrin cytoskeleton for red blood cell simulation
We simulate deformable red blood cells in the microcirculation using the immersed boundary method with a cytoskeletal model that incorporates structural details revealed by tomographic images. The elasticity of red blood cells is known to be supplied by both their lipid bilayer membranes, which resi...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5654263/ https://www.ncbi.nlm.nih.gov/pubmed/28991926 http://dx.doi.org/10.1371/journal.pcbi.1005790 |
_version_ | 1783273384227897344 |
---|---|
author | Fai, Thomas G. Leo-Macias, Alejandra Stokes, David L. Peskin, Charles S. |
author_facet | Fai, Thomas G. Leo-Macias, Alejandra Stokes, David L. Peskin, Charles S. |
author_sort | Fai, Thomas G. |
collection | PubMed |
description | We simulate deformable red blood cells in the microcirculation using the immersed boundary method with a cytoskeletal model that incorporates structural details revealed by tomographic images. The elasticity of red blood cells is known to be supplied by both their lipid bilayer membranes, which resist bending and local changes in area, and their cytoskeletons, which resist in-plane shear. The cytoskeleton consists of spectrin tetramers that are tethered to the lipid bilayer by ankyrin and by actin-based junctional complexes. We model the cytoskeleton as a random geometric graph, with nodes corresponding to junctional complexes and with edges corresponding to spectrin tetramers such that the edge lengths are given by the end-to-end distances between nodes. The statistical properties of this graph are based on distributions gathered from three-dimensional tomographic images of the cytoskeleton by a segmentation algorithm. We show that the elastic response of our model cytoskeleton, in which the spectrin polymers are treated as entropic springs, is in good agreement with the experimentally measured shear modulus. By simulating red blood cells in flow with the immersed boundary method, we compare this discrete cytoskeletal model to an existing continuum model and predict the extent to which dynamic spectrin network connectivity can protect against failure in the case of a red cell subjected to an applied strain. The methods presented here could form the basis of disease- and patient-specific computational studies of hereditary diseases affecting the red cell cytoskeleton. |
format | Online Article Text |
id | pubmed-5654263 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-56542632017-11-09 Image-based model of the spectrin cytoskeleton for red blood cell simulation Fai, Thomas G. Leo-Macias, Alejandra Stokes, David L. Peskin, Charles S. PLoS Comput Biol Research Article We simulate deformable red blood cells in the microcirculation using the immersed boundary method with a cytoskeletal model that incorporates structural details revealed by tomographic images. The elasticity of red blood cells is known to be supplied by both their lipid bilayer membranes, which resist bending and local changes in area, and their cytoskeletons, which resist in-plane shear. The cytoskeleton consists of spectrin tetramers that are tethered to the lipid bilayer by ankyrin and by actin-based junctional complexes. We model the cytoskeleton as a random geometric graph, with nodes corresponding to junctional complexes and with edges corresponding to spectrin tetramers such that the edge lengths are given by the end-to-end distances between nodes. The statistical properties of this graph are based on distributions gathered from three-dimensional tomographic images of the cytoskeleton by a segmentation algorithm. We show that the elastic response of our model cytoskeleton, in which the spectrin polymers are treated as entropic springs, is in good agreement with the experimentally measured shear modulus. By simulating red blood cells in flow with the immersed boundary method, we compare this discrete cytoskeletal model to an existing continuum model and predict the extent to which dynamic spectrin network connectivity can protect against failure in the case of a red cell subjected to an applied strain. The methods presented here could form the basis of disease- and patient-specific computational studies of hereditary diseases affecting the red cell cytoskeleton. Public Library of Science 2017-10-09 /pmc/articles/PMC5654263/ /pubmed/28991926 http://dx.doi.org/10.1371/journal.pcbi.1005790 Text en © 2017 Fai et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Fai, Thomas G. Leo-Macias, Alejandra Stokes, David L. Peskin, Charles S. Image-based model of the spectrin cytoskeleton for red blood cell simulation |
title | Image-based model of the spectrin cytoskeleton for red blood cell simulation |
title_full | Image-based model of the spectrin cytoskeleton for red blood cell simulation |
title_fullStr | Image-based model of the spectrin cytoskeleton for red blood cell simulation |
title_full_unstemmed | Image-based model of the spectrin cytoskeleton for red blood cell simulation |
title_short | Image-based model of the spectrin cytoskeleton for red blood cell simulation |
title_sort | image-based model of the spectrin cytoskeleton for red blood cell simulation |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5654263/ https://www.ncbi.nlm.nih.gov/pubmed/28991926 http://dx.doi.org/10.1371/journal.pcbi.1005790 |
work_keys_str_mv | AT faithomasg imagebasedmodelofthespectrincytoskeletonforredbloodcellsimulation AT leomaciasalejandra imagebasedmodelofthespectrincytoskeletonforredbloodcellsimulation AT stokesdavidl imagebasedmodelofthespectrincytoskeletonforredbloodcellsimulation AT peskincharless imagebasedmodelofthespectrincytoskeletonforredbloodcellsimulation |