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Bayesian Rician Regression for Neuroimaging
It is well-known that data from diffusion weighted imaging (DWI) follow the Rician distribution. The Rician distribution is also relevant for functional magnetic resonance imaging (fMRI) data obtained at high temporal or spatial resolution. We propose a general regression model for non-central χ (NC...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5655010/ https://www.ncbi.nlm.nih.gov/pubmed/29104529 http://dx.doi.org/10.3389/fnins.2017.00586 |
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author | Wegmann, Bertil Eklund, Anders Villani, Mattias |
author_facet | Wegmann, Bertil Eklund, Anders Villani, Mattias |
author_sort | Wegmann, Bertil |
collection | PubMed |
description | It is well-known that data from diffusion weighted imaging (DWI) follow the Rician distribution. The Rician distribution is also relevant for functional magnetic resonance imaging (fMRI) data obtained at high temporal or spatial resolution. We propose a general regression model for non-central χ (NC-χ) distributed data, with the heteroscedastic Rician regression model as a prominent special case. The model allows both parameters in the Rician distribution to be linked to explanatory variables, with the relevant variables chosen by Bayesian variable selection. A highly efficient Markov chain Monte Carlo (MCMC) algorithm is proposed to capture full model uncertainty by simulating from the joint posterior distribution of all model parameters and the binary variable selection indicators. Simulated regression data is used to demonstrate that the Rician model is able to detect the signal much more accurately than the traditionally used Gaussian model at low signal-to-noise ratios. Using a diffusion dataset from the Human Connectome Project, it is also shown that the commonly used approximate Gaussian noise model underestimates the mean diffusivity (MD) and the fractional anisotropy (FA) in the single-diffusion tensor model compared to the Rician model. |
format | Online Article Text |
id | pubmed-5655010 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-56550102017-11-03 Bayesian Rician Regression for Neuroimaging Wegmann, Bertil Eklund, Anders Villani, Mattias Front Neurosci Neuroscience It is well-known that data from diffusion weighted imaging (DWI) follow the Rician distribution. The Rician distribution is also relevant for functional magnetic resonance imaging (fMRI) data obtained at high temporal or spatial resolution. We propose a general regression model for non-central χ (NC-χ) distributed data, with the heteroscedastic Rician regression model as a prominent special case. The model allows both parameters in the Rician distribution to be linked to explanatory variables, with the relevant variables chosen by Bayesian variable selection. A highly efficient Markov chain Monte Carlo (MCMC) algorithm is proposed to capture full model uncertainty by simulating from the joint posterior distribution of all model parameters and the binary variable selection indicators. Simulated regression data is used to demonstrate that the Rician model is able to detect the signal much more accurately than the traditionally used Gaussian model at low signal-to-noise ratios. Using a diffusion dataset from the Human Connectome Project, it is also shown that the commonly used approximate Gaussian noise model underestimates the mean diffusivity (MD) and the fractional anisotropy (FA) in the single-diffusion tensor model compared to the Rician model. Frontiers Media S.A. 2017-10-20 /pmc/articles/PMC5655010/ /pubmed/29104529 http://dx.doi.org/10.3389/fnins.2017.00586 Text en Copyright © 2017 Wegmann, Eklund and Villani. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Wegmann, Bertil Eklund, Anders Villani, Mattias Bayesian Rician Regression for Neuroimaging |
title | Bayesian Rician Regression for Neuroimaging |
title_full | Bayesian Rician Regression for Neuroimaging |
title_fullStr | Bayesian Rician Regression for Neuroimaging |
title_full_unstemmed | Bayesian Rician Regression for Neuroimaging |
title_short | Bayesian Rician Regression for Neuroimaging |
title_sort | bayesian rician regression for neuroimaging |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5655010/ https://www.ncbi.nlm.nih.gov/pubmed/29104529 http://dx.doi.org/10.3389/fnins.2017.00586 |
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