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Multi-wavelength anomalous diffraction de novo phasing using a two-colour X-ray free-electron laser with wide tunability

Serial femtosecond crystallography at X-ray free-electron lasers (XFELs) offers unprecedented possibilities for macromolecular structure determination of systems prone to radiation damage. However, de novo structure determination, i.e., without prior structural knowledge, is complicated by the inher...

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Autores principales: Gorel, Alexander, Motomura, Koji, Fukuzawa, Hironobu, Doak, R. Bruce, Grünbein, Marie Luise, Hilpert, Mario, Inoue, Ichiro, Kloos, Marco, Kovácsová, Gabriela, Nango, Eriko, Nass, Karol, Roome, Christopher M., Shoeman, Robert L., Tanaka, Rie, Tono, Kensuke, Joti, Yasumasa, Yabashi, Makina, Iwata, So, Foucar, Lutz, Ueda, Kiyoshi, Barends, Thomas R. M., Schlichting, Ilme
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5660077/
https://www.ncbi.nlm.nih.gov/pubmed/29079797
http://dx.doi.org/10.1038/s41467-017-00754-7
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author Gorel, Alexander
Motomura, Koji
Fukuzawa, Hironobu
Doak, R. Bruce
Grünbein, Marie Luise
Hilpert, Mario
Inoue, Ichiro
Kloos, Marco
Kovácsová, Gabriela
Nango, Eriko
Nass, Karol
Roome, Christopher M.
Shoeman, Robert L.
Tanaka, Rie
Tono, Kensuke
Joti, Yasumasa
Yabashi, Makina
Iwata, So
Foucar, Lutz
Ueda, Kiyoshi
Barends, Thomas R. M.
Schlichting, Ilme
author_facet Gorel, Alexander
Motomura, Koji
Fukuzawa, Hironobu
Doak, R. Bruce
Grünbein, Marie Luise
Hilpert, Mario
Inoue, Ichiro
Kloos, Marco
Kovácsová, Gabriela
Nango, Eriko
Nass, Karol
Roome, Christopher M.
Shoeman, Robert L.
Tanaka, Rie
Tono, Kensuke
Joti, Yasumasa
Yabashi, Makina
Iwata, So
Foucar, Lutz
Ueda, Kiyoshi
Barends, Thomas R. M.
Schlichting, Ilme
author_sort Gorel, Alexander
collection PubMed
description Serial femtosecond crystallography at X-ray free-electron lasers (XFELs) offers unprecedented possibilities for macromolecular structure determination of systems prone to radiation damage. However, de novo structure determination, i.e., without prior structural knowledge, is complicated by the inherent inaccuracy of serial femtosecond crystallography data. By its very nature, serial femtosecond crystallography data collection entails shot-to-shot fluctuations in X-ray wavelength and intensity as well as variations in crystal size and quality that must be averaged out. Hence, to obtain accurate diffraction intensities for de novo phasing, large numbers of diffraction patterns are required, and, concomitantly large volumes of sample and long X-ray free-electron laser beamtimes. Here we show that serial femtosecond crystallography data collected using simultaneous two-colour X-ray free-electron laser pulses can be used for multiple wavelength anomalous dispersion phasing. The phase angle determination is significantly more accurate than for single-colour phasing. We anticipate that two-colour multiple wavelength anomalous dispersion phasing will enhance structure determination of difficult-to-phase proteins at X-ray free-electron lasers.
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spelling pubmed-56600772017-10-31 Multi-wavelength anomalous diffraction de novo phasing using a two-colour X-ray free-electron laser with wide tunability Gorel, Alexander Motomura, Koji Fukuzawa, Hironobu Doak, R. Bruce Grünbein, Marie Luise Hilpert, Mario Inoue, Ichiro Kloos, Marco Kovácsová, Gabriela Nango, Eriko Nass, Karol Roome, Christopher M. Shoeman, Robert L. Tanaka, Rie Tono, Kensuke Joti, Yasumasa Yabashi, Makina Iwata, So Foucar, Lutz Ueda, Kiyoshi Barends, Thomas R. M. Schlichting, Ilme Nat Commun Article Serial femtosecond crystallography at X-ray free-electron lasers (XFELs) offers unprecedented possibilities for macromolecular structure determination of systems prone to radiation damage. However, de novo structure determination, i.e., without prior structural knowledge, is complicated by the inherent inaccuracy of serial femtosecond crystallography data. By its very nature, serial femtosecond crystallography data collection entails shot-to-shot fluctuations in X-ray wavelength and intensity as well as variations in crystal size and quality that must be averaged out. Hence, to obtain accurate diffraction intensities for de novo phasing, large numbers of diffraction patterns are required, and, concomitantly large volumes of sample and long X-ray free-electron laser beamtimes. Here we show that serial femtosecond crystallography data collected using simultaneous two-colour X-ray free-electron laser pulses can be used for multiple wavelength anomalous dispersion phasing. The phase angle determination is significantly more accurate than for single-colour phasing. We anticipate that two-colour multiple wavelength anomalous dispersion phasing will enhance structure determination of difficult-to-phase proteins at X-ray free-electron lasers. Nature Publishing Group UK 2017-10-27 /pmc/articles/PMC5660077/ /pubmed/29079797 http://dx.doi.org/10.1038/s41467-017-00754-7 Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Gorel, Alexander
Motomura, Koji
Fukuzawa, Hironobu
Doak, R. Bruce
Grünbein, Marie Luise
Hilpert, Mario
Inoue, Ichiro
Kloos, Marco
Kovácsová, Gabriela
Nango, Eriko
Nass, Karol
Roome, Christopher M.
Shoeman, Robert L.
Tanaka, Rie
Tono, Kensuke
Joti, Yasumasa
Yabashi, Makina
Iwata, So
Foucar, Lutz
Ueda, Kiyoshi
Barends, Thomas R. M.
Schlichting, Ilme
Multi-wavelength anomalous diffraction de novo phasing using a two-colour X-ray free-electron laser with wide tunability
title Multi-wavelength anomalous diffraction de novo phasing using a two-colour X-ray free-electron laser with wide tunability
title_full Multi-wavelength anomalous diffraction de novo phasing using a two-colour X-ray free-electron laser with wide tunability
title_fullStr Multi-wavelength anomalous diffraction de novo phasing using a two-colour X-ray free-electron laser with wide tunability
title_full_unstemmed Multi-wavelength anomalous diffraction de novo phasing using a two-colour X-ray free-electron laser with wide tunability
title_short Multi-wavelength anomalous diffraction de novo phasing using a two-colour X-ray free-electron laser with wide tunability
title_sort multi-wavelength anomalous diffraction de novo phasing using a two-colour x-ray free-electron laser with wide tunability
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5660077/
https://www.ncbi.nlm.nih.gov/pubmed/29079797
http://dx.doi.org/10.1038/s41467-017-00754-7
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