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Analyzing microtomography data with Python and the scikit-image library
The exploration and processing of images is a vital aspect of the scientific workflows of many X-ray imaging modalities. Users require tools that combine interactivity, versatility, and performance. scikit-image is an open-source image processing toolkit for the Python language that supports a large...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5660892/ https://www.ncbi.nlm.nih.gov/pubmed/29142808 http://dx.doi.org/10.1186/s40679-016-0031-0 |
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author | Gouillart, Emmanuelle Nunez-Iglesias, Juan van der Walt, Stéfan |
author_facet | Gouillart, Emmanuelle Nunez-Iglesias, Juan van der Walt, Stéfan |
author_sort | Gouillart, Emmanuelle |
collection | PubMed |
description | The exploration and processing of images is a vital aspect of the scientific workflows of many X-ray imaging modalities. Users require tools that combine interactivity, versatility, and performance. scikit-image is an open-source image processing toolkit for the Python language that supports a large variety of file formats and is compatible with 2D and 3D images. The toolkit exposes a simple programming interface, with thematic modules grouping functions according to their purpose, such as image restoration, segmentation, and measurements. scikit-image users benefit from a rich scientific Python ecosystem that contains many powerful libraries for tasks such as visualization or machine learning. scikit-image combines a gentle learning curve, versatile image processing capabilities, and the scalable performance required for the high-throughput analysis of X-ray imaging data. |
format | Online Article Text |
id | pubmed-5660892 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-56608922017-11-13 Analyzing microtomography data with Python and the scikit-image library Gouillart, Emmanuelle Nunez-Iglesias, Juan van der Walt, Stéfan Adv Struct Chem Imaging Research The exploration and processing of images is a vital aspect of the scientific workflows of many X-ray imaging modalities. Users require tools that combine interactivity, versatility, and performance. scikit-image is an open-source image processing toolkit for the Python language that supports a large variety of file formats and is compatible with 2D and 3D images. The toolkit exposes a simple programming interface, with thematic modules grouping functions according to their purpose, such as image restoration, segmentation, and measurements. scikit-image users benefit from a rich scientific Python ecosystem that contains many powerful libraries for tasks such as visualization or machine learning. scikit-image combines a gentle learning curve, versatile image processing capabilities, and the scalable performance required for the high-throughput analysis of X-ray imaging data. Springer International Publishing 2016-12-07 2017 /pmc/articles/PMC5660892/ /pubmed/29142808 http://dx.doi.org/10.1186/s40679-016-0031-0 Text en © The Author(s) 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. |
spellingShingle | Research Gouillart, Emmanuelle Nunez-Iglesias, Juan van der Walt, Stéfan Analyzing microtomography data with Python and the scikit-image library |
title | Analyzing microtomography data with Python and the scikit-image library |
title_full | Analyzing microtomography data with Python and the scikit-image library |
title_fullStr | Analyzing microtomography data with Python and the scikit-image library |
title_full_unstemmed | Analyzing microtomography data with Python and the scikit-image library |
title_short | Analyzing microtomography data with Python and the scikit-image library |
title_sort | analyzing microtomography data with python and the scikit-image library |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5660892/ https://www.ncbi.nlm.nih.gov/pubmed/29142808 http://dx.doi.org/10.1186/s40679-016-0031-0 |
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