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Reliable and Reproducible GABA Measurements Using Automated Spectral Prescription at Ultra-High Field
Purpose: To evaluate spectral acquisition processes important for obtaining reliable and reproducible γ-aminobutyric acid (GABA) signals from volunteers in brain regions that are frequently used for neuroimaging studies [anterior cingulate cortex (ACC), superior temporal gyrus, and caudate] at ultra...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5661373/ https://www.ncbi.nlm.nih.gov/pubmed/29118697 http://dx.doi.org/10.3389/fnhum.2017.00506 |
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author | Li, Yan Bian, Wei Larson, Peder Crane, Jason C. Parvathaneni, Prasanna Nagarajan, Srikantan Nelson, Sarah J. |
author_facet | Li, Yan Bian, Wei Larson, Peder Crane, Jason C. Parvathaneni, Prasanna Nagarajan, Srikantan Nelson, Sarah J. |
author_sort | Li, Yan |
collection | PubMed |
description | Purpose: To evaluate spectral acquisition processes important for obtaining reliable and reproducible γ-aminobutyric acid (GABA) signals from volunteers in brain regions that are frequently used for neuroimaging studies [anterior cingulate cortex (ACC), superior temporal gyrus, and caudate] at ultra-high field. Methods: Ten healthy volunteers were studied using a single-voxel Point-RESolved Spectrosocpy (PRESS) sequence with band selective inversion with gradient dephasing pulses (BASING). The editing pulse was designed to be symmetrically placed at 2.0 and 1.4 ppm in the two cycles to reduce the co-editing of macro-molecules (MM). Spectral data were obtained with phase encoding matrix 8 × 8 × 1 and two editing cycles or 1 × 1 × 1 and 64 editing/64 non-editing. The total acquisition time was approximately 4.5 min for each acquisition. An automated MRS prescription method was utilized for the placement of the GABA scan location in 5/10 subjects. Three regions of interest were predefined in the MNI152 space and then registered and transformed to subject space. These volunteers also had repeat scans to examine between-session reproducibility. Results: The placement of editing pulses symmetrically at 1.7 ppm reduced the effect of MM contributions and provided more accurate GABA estimation. Chemical shift misregistration errors caused by classic PRESS localization sequence are more significant at ultra-high field strength. Therefore, a large over-excitation factor was needed to reduce this error. Furthermore, the inefficiency of saturation bands and unspoiled coherence could also interfere with the quality of the data. Reliable recovery of metabolite signals resulted from the implementation of 8 × 8 × 1 phase encoding that successfully removed artifacts and errors, without compromising the total acquisition time. Between successive scans on the same subject, dice overlap ratios of the excited spectral volume between the two scans were in the range of 92–95%. Within subject variability of metabolites between two repeat scans was smaller in the ACC and left superior temporal gyrus when compared to that in the right caudate, with averaged coefficients of variation being 3.6, 6.0, and 16.9%, respectively. Conclusion: This study demonstrated the feasibility of obtaining reliable and reproducible GABA measurements at ultra-high field. |
format | Online Article Text |
id | pubmed-5661373 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-56613732017-11-08 Reliable and Reproducible GABA Measurements Using Automated Spectral Prescription at Ultra-High Field Li, Yan Bian, Wei Larson, Peder Crane, Jason C. Parvathaneni, Prasanna Nagarajan, Srikantan Nelson, Sarah J. Front Hum Neurosci Neuroscience Purpose: To evaluate spectral acquisition processes important for obtaining reliable and reproducible γ-aminobutyric acid (GABA) signals from volunteers in brain regions that are frequently used for neuroimaging studies [anterior cingulate cortex (ACC), superior temporal gyrus, and caudate] at ultra-high field. Methods: Ten healthy volunteers were studied using a single-voxel Point-RESolved Spectrosocpy (PRESS) sequence with band selective inversion with gradient dephasing pulses (BASING). The editing pulse was designed to be symmetrically placed at 2.0 and 1.4 ppm in the two cycles to reduce the co-editing of macro-molecules (MM). Spectral data were obtained with phase encoding matrix 8 × 8 × 1 and two editing cycles or 1 × 1 × 1 and 64 editing/64 non-editing. The total acquisition time was approximately 4.5 min for each acquisition. An automated MRS prescription method was utilized for the placement of the GABA scan location in 5/10 subjects. Three regions of interest were predefined in the MNI152 space and then registered and transformed to subject space. These volunteers also had repeat scans to examine between-session reproducibility. Results: The placement of editing pulses symmetrically at 1.7 ppm reduced the effect of MM contributions and provided more accurate GABA estimation. Chemical shift misregistration errors caused by classic PRESS localization sequence are more significant at ultra-high field strength. Therefore, a large over-excitation factor was needed to reduce this error. Furthermore, the inefficiency of saturation bands and unspoiled coherence could also interfere with the quality of the data. Reliable recovery of metabolite signals resulted from the implementation of 8 × 8 × 1 phase encoding that successfully removed artifacts and errors, without compromising the total acquisition time. Between successive scans on the same subject, dice overlap ratios of the excited spectral volume between the two scans were in the range of 92–95%. Within subject variability of metabolites between two repeat scans was smaller in the ACC and left superior temporal gyrus when compared to that in the right caudate, with averaged coefficients of variation being 3.6, 6.0, and 16.9%, respectively. Conclusion: This study demonstrated the feasibility of obtaining reliable and reproducible GABA measurements at ultra-high field. Frontiers Media S.A. 2017-10-25 /pmc/articles/PMC5661373/ /pubmed/29118697 http://dx.doi.org/10.3389/fnhum.2017.00506 Text en Copyright © 2017 Li, Bian, Larson, Crane, Parvathaneni, Nagarajan and Nelson. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Li, Yan Bian, Wei Larson, Peder Crane, Jason C. Parvathaneni, Prasanna Nagarajan, Srikantan Nelson, Sarah J. Reliable and Reproducible GABA Measurements Using Automated Spectral Prescription at Ultra-High Field |
title | Reliable and Reproducible GABA Measurements Using Automated Spectral Prescription at Ultra-High Field |
title_full | Reliable and Reproducible GABA Measurements Using Automated Spectral Prescription at Ultra-High Field |
title_fullStr | Reliable and Reproducible GABA Measurements Using Automated Spectral Prescription at Ultra-High Field |
title_full_unstemmed | Reliable and Reproducible GABA Measurements Using Automated Spectral Prescription at Ultra-High Field |
title_short | Reliable and Reproducible GABA Measurements Using Automated Spectral Prescription at Ultra-High Field |
title_sort | reliable and reproducible gaba measurements using automated spectral prescription at ultra-high field |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5661373/ https://www.ncbi.nlm.nih.gov/pubmed/29118697 http://dx.doi.org/10.3389/fnhum.2017.00506 |
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