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Quantifying the benefit of a proteome reserve in fluctuating environments

The overexpression of proteins is a major burden for fast-growing bacteria. Paradoxically, recent characterization of the proteome of Escherichia coli found many proteins expressed in excess of what appears to be optimal for exponential growth. Here, we quantitatively investigate the possibility tha...

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Autores principales: Mori, Matteo, Schink, Severin, Erickson, David W., Gerland, Ulrich, Hwa, Terence
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5663898/
https://www.ncbi.nlm.nih.gov/pubmed/29089487
http://dx.doi.org/10.1038/s41467-017-01242-8
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author Mori, Matteo
Schink, Severin
Erickson, David W.
Gerland, Ulrich
Hwa, Terence
author_facet Mori, Matteo
Schink, Severin
Erickson, David W.
Gerland, Ulrich
Hwa, Terence
author_sort Mori, Matteo
collection PubMed
description The overexpression of proteins is a major burden for fast-growing bacteria. Paradoxically, recent characterization of the proteome of Escherichia coli found many proteins expressed in excess of what appears to be optimal for exponential growth. Here, we quantitatively investigate the possibility that this overexpression constitutes a strategic reserve kept by starving cells to quickly meet demand upon sudden improvement in growth conditions. For cells exposed to repeated famine-and-feast cycles, we derive a simple relation between the duration of feast and the allocation of the ribosomal protein reserve to maximize the overall gain in biomass during the feast.
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spelling pubmed-56638982017-11-02 Quantifying the benefit of a proteome reserve in fluctuating environments Mori, Matteo Schink, Severin Erickson, David W. Gerland, Ulrich Hwa, Terence Nat Commun Article The overexpression of proteins is a major burden for fast-growing bacteria. Paradoxically, recent characterization of the proteome of Escherichia coli found many proteins expressed in excess of what appears to be optimal for exponential growth. Here, we quantitatively investigate the possibility that this overexpression constitutes a strategic reserve kept by starving cells to quickly meet demand upon sudden improvement in growth conditions. For cells exposed to repeated famine-and-feast cycles, we derive a simple relation between the duration of feast and the allocation of the ribosomal protein reserve to maximize the overall gain in biomass during the feast. Nature Publishing Group UK 2017-10-31 /pmc/articles/PMC5663898/ /pubmed/29089487 http://dx.doi.org/10.1038/s41467-017-01242-8 Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Mori, Matteo
Schink, Severin
Erickson, David W.
Gerland, Ulrich
Hwa, Terence
Quantifying the benefit of a proteome reserve in fluctuating environments
title Quantifying the benefit of a proteome reserve in fluctuating environments
title_full Quantifying the benefit of a proteome reserve in fluctuating environments
title_fullStr Quantifying the benefit of a proteome reserve in fluctuating environments
title_full_unstemmed Quantifying the benefit of a proteome reserve in fluctuating environments
title_short Quantifying the benefit of a proteome reserve in fluctuating environments
title_sort quantifying the benefit of a proteome reserve in fluctuating environments
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5663898/
https://www.ncbi.nlm.nih.gov/pubmed/29089487
http://dx.doi.org/10.1038/s41467-017-01242-8
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