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Draft genome sequence of a biosurfactant producing, Bacillus aquimaris strain SAMM MCC 3014 isolated from Indian Arabian coastline sea water
Bacillus aquimaris strain SAMM, a biosurfactant producing moderately halophilic marine bacterium was isolated from Indian Arabian coastline sea water. The strain was found to tolerate up to 2.7 M NaCl indicating osmotic stress sustainable physiological systems. We report here the draft genome sequen...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Ivyspring International Publisher
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5666515/ https://www.ncbi.nlm.nih.gov/pubmed/29109799 http://dx.doi.org/10.7150/jgen.21724 |
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author | Waghmode, Samadhan Dama, Laxmikant Hingamire, Tejashri Bharti, Nidhi Doijad, Swapnil Suryavanshi, Mangesh |
author_facet | Waghmode, Samadhan Dama, Laxmikant Hingamire, Tejashri Bharti, Nidhi Doijad, Swapnil Suryavanshi, Mangesh |
author_sort | Waghmode, Samadhan |
collection | PubMed |
description | Bacillus aquimaris strain SAMM, a biosurfactant producing moderately halophilic marine bacterium was isolated from Indian Arabian coastline sea water. The strain was found to tolerate up to 2.7 M NaCl indicating osmotic stress sustainable physiological systems. We report here the draft genome sequence of B. aquimaris SAMM, as a candidate bacterium for bioactive surfactant producer. The whole genome sequence with 161 scaffolds, 4,414,932 bp and 44.8% of G+C content for SAMM was obtained using Illumina MiSeq sequencing technology. Annotation was added by the PGAP and RAST prokaryotic genome annotation service and shown 4,247 coding sequences, 123 RNAs genes, classified in 453 subsystems. Several genes encoding enzymatic activities against the high molecular weight polysaccharides, osmotic stress response and siderophore synthesis of potential biotechnological importance were identified in the genome. |
format | Online Article Text |
id | pubmed-5666515 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Ivyspring International Publisher |
record_format | MEDLINE/PubMed |
spelling | pubmed-56665152017-11-06 Draft genome sequence of a biosurfactant producing, Bacillus aquimaris strain SAMM MCC 3014 isolated from Indian Arabian coastline sea water Waghmode, Samadhan Dama, Laxmikant Hingamire, Tejashri Bharti, Nidhi Doijad, Swapnil Suryavanshi, Mangesh J Genomics Short Research Paper Bacillus aquimaris strain SAMM, a biosurfactant producing moderately halophilic marine bacterium was isolated from Indian Arabian coastline sea water. The strain was found to tolerate up to 2.7 M NaCl indicating osmotic stress sustainable physiological systems. We report here the draft genome sequence of B. aquimaris SAMM, as a candidate bacterium for bioactive surfactant producer. The whole genome sequence with 161 scaffolds, 4,414,932 bp and 44.8% of G+C content for SAMM was obtained using Illumina MiSeq sequencing technology. Annotation was added by the PGAP and RAST prokaryotic genome annotation service and shown 4,247 coding sequences, 123 RNAs genes, classified in 453 subsystems. Several genes encoding enzymatic activities against the high molecular weight polysaccharides, osmotic stress response and siderophore synthesis of potential biotechnological importance were identified in the genome. Ivyspring International Publisher 2017-10-08 /pmc/articles/PMC5666515/ /pubmed/29109799 http://dx.doi.org/10.7150/jgen.21724 Text en © Ivyspring International Publisher This is an open access article distributed under the terms of the Creative Commons Attribution (CC BY-NC) license (https://creativecommons.org/licenses/by-nc/4.0/). See http://ivyspring.com/terms for full terms and conditions. |
spellingShingle | Short Research Paper Waghmode, Samadhan Dama, Laxmikant Hingamire, Tejashri Bharti, Nidhi Doijad, Swapnil Suryavanshi, Mangesh Draft genome sequence of a biosurfactant producing, Bacillus aquimaris strain SAMM MCC 3014 isolated from Indian Arabian coastline sea water |
title | Draft genome sequence of a biosurfactant producing, Bacillus aquimaris strain SAMM MCC 3014 isolated from Indian Arabian coastline sea water |
title_full | Draft genome sequence of a biosurfactant producing, Bacillus aquimaris strain SAMM MCC 3014 isolated from Indian Arabian coastline sea water |
title_fullStr | Draft genome sequence of a biosurfactant producing, Bacillus aquimaris strain SAMM MCC 3014 isolated from Indian Arabian coastline sea water |
title_full_unstemmed | Draft genome sequence of a biosurfactant producing, Bacillus aquimaris strain SAMM MCC 3014 isolated from Indian Arabian coastline sea water |
title_short | Draft genome sequence of a biosurfactant producing, Bacillus aquimaris strain SAMM MCC 3014 isolated from Indian Arabian coastline sea water |
title_sort | draft genome sequence of a biosurfactant producing, bacillus aquimaris strain samm mcc 3014 isolated from indian arabian coastline sea water |
topic | Short Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5666515/ https://www.ncbi.nlm.nih.gov/pubmed/29109799 http://dx.doi.org/10.7150/jgen.21724 |
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