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Metabolomics based predictive biomarker model of ARDS: A systemic measure of clinical hypoxemia

Despite advancements in ventilator technologies, lung supportive and rescue therapies, the outcome and prognostication in acute respiratory distress syndrome (ARDS) remains incremental and ambiguous. Metabolomics is a potential insightful measure to the diagnostic approaches practiced in critical di...

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Autores principales: Viswan, Akhila, Singh, Chandan, Rai, Ratan Kumar, Azim, Afzal, Sinha, Neeraj, Baronia, Arvind Kumar
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5667881/
https://www.ncbi.nlm.nih.gov/pubmed/29095932
http://dx.doi.org/10.1371/journal.pone.0187545
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author Viswan, Akhila
Singh, Chandan
Rai, Ratan Kumar
Azim, Afzal
Sinha, Neeraj
Baronia, Arvind Kumar
author_facet Viswan, Akhila
Singh, Chandan
Rai, Ratan Kumar
Azim, Afzal
Sinha, Neeraj
Baronia, Arvind Kumar
author_sort Viswan, Akhila
collection PubMed
description Despite advancements in ventilator technologies, lung supportive and rescue therapies, the outcome and prognostication in acute respiratory distress syndrome (ARDS) remains incremental and ambiguous. Metabolomics is a potential insightful measure to the diagnostic approaches practiced in critical disease settings. In our study patients diagnosed with mild and moderate/severe ARDS clinically governed by hypoxemic P/F ratio between 100–300 but with indistinct molecular phenotype were discriminated employing nuclear magnetic resonance (NMR) based metabolomics of mini bronchoalveolar lavage fluid (mBALF). Resulting biomarker prototype comprising six metabolites was substantiated highlighting ARDS susceptibility/recovery. Both the groups (mild and moderate/severe ARDS) showed distinct biochemical profile based on 83.3% classification by discriminant function analysis and cross validated accuracy of 91% using partial least squares discriminant analysis as major classifier. The predictive performance of narrowed down six metabolites were found analogous with chemometrics. The proposed biomarker model consisting of six metabolites proline, lysine/arginine, taurine, threonine and glutamate were found characteristic of ARDS sub-stages with aberrant metabolism observed mainly in arginine, proline metabolism, lysine synthesis and so forth correlating to diseased metabotype. Thus NMR based metabolomics has provided new insight into ARDS sub-stages and conclusively a precise biomarker model proposed, reflecting underlying metabolic dysfunction aiding prior clinical decision making.
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spelling pubmed-56678812017-11-17 Metabolomics based predictive biomarker model of ARDS: A systemic measure of clinical hypoxemia Viswan, Akhila Singh, Chandan Rai, Ratan Kumar Azim, Afzal Sinha, Neeraj Baronia, Arvind Kumar PLoS One Research Article Despite advancements in ventilator technologies, lung supportive and rescue therapies, the outcome and prognostication in acute respiratory distress syndrome (ARDS) remains incremental and ambiguous. Metabolomics is a potential insightful measure to the diagnostic approaches practiced in critical disease settings. In our study patients diagnosed with mild and moderate/severe ARDS clinically governed by hypoxemic P/F ratio between 100–300 but with indistinct molecular phenotype were discriminated employing nuclear magnetic resonance (NMR) based metabolomics of mini bronchoalveolar lavage fluid (mBALF). Resulting biomarker prototype comprising six metabolites was substantiated highlighting ARDS susceptibility/recovery. Both the groups (mild and moderate/severe ARDS) showed distinct biochemical profile based on 83.3% classification by discriminant function analysis and cross validated accuracy of 91% using partial least squares discriminant analysis as major classifier. The predictive performance of narrowed down six metabolites were found analogous with chemometrics. The proposed biomarker model consisting of six metabolites proline, lysine/arginine, taurine, threonine and glutamate were found characteristic of ARDS sub-stages with aberrant metabolism observed mainly in arginine, proline metabolism, lysine synthesis and so forth correlating to diseased metabotype. Thus NMR based metabolomics has provided new insight into ARDS sub-stages and conclusively a precise biomarker model proposed, reflecting underlying metabolic dysfunction aiding prior clinical decision making. Public Library of Science 2017-11-02 /pmc/articles/PMC5667881/ /pubmed/29095932 http://dx.doi.org/10.1371/journal.pone.0187545 Text en © 2017 Viswan et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Viswan, Akhila
Singh, Chandan
Rai, Ratan Kumar
Azim, Afzal
Sinha, Neeraj
Baronia, Arvind Kumar
Metabolomics based predictive biomarker model of ARDS: A systemic measure of clinical hypoxemia
title Metabolomics based predictive biomarker model of ARDS: A systemic measure of clinical hypoxemia
title_full Metabolomics based predictive biomarker model of ARDS: A systemic measure of clinical hypoxemia
title_fullStr Metabolomics based predictive biomarker model of ARDS: A systemic measure of clinical hypoxemia
title_full_unstemmed Metabolomics based predictive biomarker model of ARDS: A systemic measure of clinical hypoxemia
title_short Metabolomics based predictive biomarker model of ARDS: A systemic measure of clinical hypoxemia
title_sort metabolomics based predictive biomarker model of ards: a systemic measure of clinical hypoxemia
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5667881/
https://www.ncbi.nlm.nih.gov/pubmed/29095932
http://dx.doi.org/10.1371/journal.pone.0187545
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