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Metabolomics based predictive biomarker model of ARDS: A systemic measure of clinical hypoxemia
Despite advancements in ventilator technologies, lung supportive and rescue therapies, the outcome and prognostication in acute respiratory distress syndrome (ARDS) remains incremental and ambiguous. Metabolomics is a potential insightful measure to the diagnostic approaches practiced in critical di...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5667881/ https://www.ncbi.nlm.nih.gov/pubmed/29095932 http://dx.doi.org/10.1371/journal.pone.0187545 |
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author | Viswan, Akhila Singh, Chandan Rai, Ratan Kumar Azim, Afzal Sinha, Neeraj Baronia, Arvind Kumar |
author_facet | Viswan, Akhila Singh, Chandan Rai, Ratan Kumar Azim, Afzal Sinha, Neeraj Baronia, Arvind Kumar |
author_sort | Viswan, Akhila |
collection | PubMed |
description | Despite advancements in ventilator technologies, lung supportive and rescue therapies, the outcome and prognostication in acute respiratory distress syndrome (ARDS) remains incremental and ambiguous. Metabolomics is a potential insightful measure to the diagnostic approaches practiced in critical disease settings. In our study patients diagnosed with mild and moderate/severe ARDS clinically governed by hypoxemic P/F ratio between 100–300 but with indistinct molecular phenotype were discriminated employing nuclear magnetic resonance (NMR) based metabolomics of mini bronchoalveolar lavage fluid (mBALF). Resulting biomarker prototype comprising six metabolites was substantiated highlighting ARDS susceptibility/recovery. Both the groups (mild and moderate/severe ARDS) showed distinct biochemical profile based on 83.3% classification by discriminant function analysis and cross validated accuracy of 91% using partial least squares discriminant analysis as major classifier. The predictive performance of narrowed down six metabolites were found analogous with chemometrics. The proposed biomarker model consisting of six metabolites proline, lysine/arginine, taurine, threonine and glutamate were found characteristic of ARDS sub-stages with aberrant metabolism observed mainly in arginine, proline metabolism, lysine synthesis and so forth correlating to diseased metabotype. Thus NMR based metabolomics has provided new insight into ARDS sub-stages and conclusively a precise biomarker model proposed, reflecting underlying metabolic dysfunction aiding prior clinical decision making. |
format | Online Article Text |
id | pubmed-5667881 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-56678812017-11-17 Metabolomics based predictive biomarker model of ARDS: A systemic measure of clinical hypoxemia Viswan, Akhila Singh, Chandan Rai, Ratan Kumar Azim, Afzal Sinha, Neeraj Baronia, Arvind Kumar PLoS One Research Article Despite advancements in ventilator technologies, lung supportive and rescue therapies, the outcome and prognostication in acute respiratory distress syndrome (ARDS) remains incremental and ambiguous. Metabolomics is a potential insightful measure to the diagnostic approaches practiced in critical disease settings. In our study patients diagnosed with mild and moderate/severe ARDS clinically governed by hypoxemic P/F ratio between 100–300 but with indistinct molecular phenotype were discriminated employing nuclear magnetic resonance (NMR) based metabolomics of mini bronchoalveolar lavage fluid (mBALF). Resulting biomarker prototype comprising six metabolites was substantiated highlighting ARDS susceptibility/recovery. Both the groups (mild and moderate/severe ARDS) showed distinct biochemical profile based on 83.3% classification by discriminant function analysis and cross validated accuracy of 91% using partial least squares discriminant analysis as major classifier. The predictive performance of narrowed down six metabolites were found analogous with chemometrics. The proposed biomarker model consisting of six metabolites proline, lysine/arginine, taurine, threonine and glutamate were found characteristic of ARDS sub-stages with aberrant metabolism observed mainly in arginine, proline metabolism, lysine synthesis and so forth correlating to diseased metabotype. Thus NMR based metabolomics has provided new insight into ARDS sub-stages and conclusively a precise biomarker model proposed, reflecting underlying metabolic dysfunction aiding prior clinical decision making. Public Library of Science 2017-11-02 /pmc/articles/PMC5667881/ /pubmed/29095932 http://dx.doi.org/10.1371/journal.pone.0187545 Text en © 2017 Viswan et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Viswan, Akhila Singh, Chandan Rai, Ratan Kumar Azim, Afzal Sinha, Neeraj Baronia, Arvind Kumar Metabolomics based predictive biomarker model of ARDS: A systemic measure of clinical hypoxemia |
title | Metabolomics based predictive biomarker model of ARDS: A systemic measure of clinical hypoxemia |
title_full | Metabolomics based predictive biomarker model of ARDS: A systemic measure of clinical hypoxemia |
title_fullStr | Metabolomics based predictive biomarker model of ARDS: A systemic measure of clinical hypoxemia |
title_full_unstemmed | Metabolomics based predictive biomarker model of ARDS: A systemic measure of clinical hypoxemia |
title_short | Metabolomics based predictive biomarker model of ARDS: A systemic measure of clinical hypoxemia |
title_sort | metabolomics based predictive biomarker model of ards: a systemic measure of clinical hypoxemia |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5667881/ https://www.ncbi.nlm.nih.gov/pubmed/29095932 http://dx.doi.org/10.1371/journal.pone.0187545 |
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