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Genetic variability in Italian populations of Drosophila suzukii
BACKGROUND: Drosophila suzukii is a highly destructive pest species, causing substantial economic losses in soft fruit production. To better understand migration patterns, gene flow and adaptation in invaded regions, we studied the genetic structure of D. suzukii collected across Italy, where it was...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5669006/ https://www.ncbi.nlm.nih.gov/pubmed/29096606 http://dx.doi.org/10.1186/s12863-017-0558-7 |
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author | Tait, Gabriella Vezzulli, Silvia Sassù, Fabiana Antonini, Gloria Biondi, Antonio Baser, Nuray Sollai, Giorgia Cini, Alessandro Tonina, Lorenzo Ometto, Lino Anfora, Gianfranco |
author_facet | Tait, Gabriella Vezzulli, Silvia Sassù, Fabiana Antonini, Gloria Biondi, Antonio Baser, Nuray Sollai, Giorgia Cini, Alessandro Tonina, Lorenzo Ometto, Lino Anfora, Gianfranco |
author_sort | Tait, Gabriella |
collection | PubMed |
description | BACKGROUND: Drosophila suzukii is a highly destructive pest species, causing substantial economic losses in soft fruit production. To better understand migration patterns, gene flow and adaptation in invaded regions, we studied the genetic structure of D. suzukii collected across Italy, where it was first observed in 2008. In particular, we analysed 15 previously characterised Simple Sequence Repeat (SSR) markers to estimate genetic differentiation across the genome of 278 flies collected from nine populations. RESULTS: The nine populations showed high allelic diversity, mainly due to very high heterozygosity. The high Polymorphism Information Content (PIC) index values (ranging from 0.68 to 0.84) indicated good discrimination power for the markers. Negative fixation index (F (IS)) values in seven of the populations indicated a low level of inbreeding, as suggested by the high number of alleles. STRUCTURE, Principal Coordinate and Neighbour Joining analysis also revealed that the Sicilian population was fairly divergent compared to other Italian populations. Moreover, migration was present across all populations, with the exception of the Sicilian one, confirming its isolation relative to the mainland. CONCLUSIONS: This is the first study characterising the genetic structure of the invasive species D. suzukii in Italy. Our analysis showed extensive genetic homogeneity among D. suzukii collected in Italy. The relatively isolated Sicilian population suggests a largely human-mediated migration pattern, while the warm climate in this region allows the production of soft fruit, and the associated D. suzukii reproductive season occurring much earlier than on the rest of the peninsula. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s12863-017-0558-7) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-5669006 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-56690062017-11-08 Genetic variability in Italian populations of Drosophila suzukii Tait, Gabriella Vezzulli, Silvia Sassù, Fabiana Antonini, Gloria Biondi, Antonio Baser, Nuray Sollai, Giorgia Cini, Alessandro Tonina, Lorenzo Ometto, Lino Anfora, Gianfranco BMC Genet Research Article BACKGROUND: Drosophila suzukii is a highly destructive pest species, causing substantial economic losses in soft fruit production. To better understand migration patterns, gene flow and adaptation in invaded regions, we studied the genetic structure of D. suzukii collected across Italy, where it was first observed in 2008. In particular, we analysed 15 previously characterised Simple Sequence Repeat (SSR) markers to estimate genetic differentiation across the genome of 278 flies collected from nine populations. RESULTS: The nine populations showed high allelic diversity, mainly due to very high heterozygosity. The high Polymorphism Information Content (PIC) index values (ranging from 0.68 to 0.84) indicated good discrimination power for the markers. Negative fixation index (F (IS)) values in seven of the populations indicated a low level of inbreeding, as suggested by the high number of alleles. STRUCTURE, Principal Coordinate and Neighbour Joining analysis also revealed that the Sicilian population was fairly divergent compared to other Italian populations. Moreover, migration was present across all populations, with the exception of the Sicilian one, confirming its isolation relative to the mainland. CONCLUSIONS: This is the first study characterising the genetic structure of the invasive species D. suzukii in Italy. Our analysis showed extensive genetic homogeneity among D. suzukii collected in Italy. The relatively isolated Sicilian population suggests a largely human-mediated migration pattern, while the warm climate in this region allows the production of soft fruit, and the associated D. suzukii reproductive season occurring much earlier than on the rest of the peninsula. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s12863-017-0558-7) contains supplementary material, which is available to authorized users. BioMed Central 2017-11-03 /pmc/articles/PMC5669006/ /pubmed/29096606 http://dx.doi.org/10.1186/s12863-017-0558-7 Text en © The Author(s). 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Tait, Gabriella Vezzulli, Silvia Sassù, Fabiana Antonini, Gloria Biondi, Antonio Baser, Nuray Sollai, Giorgia Cini, Alessandro Tonina, Lorenzo Ometto, Lino Anfora, Gianfranco Genetic variability in Italian populations of Drosophila suzukii |
title | Genetic variability in Italian populations of Drosophila suzukii |
title_full | Genetic variability in Italian populations of Drosophila suzukii |
title_fullStr | Genetic variability in Italian populations of Drosophila suzukii |
title_full_unstemmed | Genetic variability in Italian populations of Drosophila suzukii |
title_short | Genetic variability in Italian populations of Drosophila suzukii |
title_sort | genetic variability in italian populations of drosophila suzukii |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5669006/ https://www.ncbi.nlm.nih.gov/pubmed/29096606 http://dx.doi.org/10.1186/s12863-017-0558-7 |
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