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Facet selectivity in gold binding peptides: exploiting interfacial water structure
Peptide sequences that can discriminate between gold facets under aqueous conditions offer a promising route to control the growth and organisation of biomimetically-synthesised gold nanoparticles. Knowledge of the interplay between sequence, conformations and interfacial properties is essential for...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Royal Society of Chemistry
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5669244/ https://www.ncbi.nlm.nih.gov/pubmed/29449926 http://dx.doi.org/10.1039/c5sc00399g |
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author | Wright, Louise B. Palafox-Hernandez, J. Pablo Rodger, P. Mark Corni, Stefano Walsh, Tiffany R. |
author_facet | Wright, Louise B. Palafox-Hernandez, J. Pablo Rodger, P. Mark Corni, Stefano Walsh, Tiffany R. |
author_sort | Wright, Louise B. |
collection | PubMed |
description | Peptide sequences that can discriminate between gold facets under aqueous conditions offer a promising route to control the growth and organisation of biomimetically-synthesised gold nanoparticles. Knowledge of the interplay between sequence, conformations and interfacial properties is essential for predictable manipulation of these biointerfaces, but the structural connections between a given peptide sequence and its binding affinity remain unclear, impeding practical advances in the field. These structural insights, at atomic-scale resolution, are not easily accessed with experimental approaches, but can be delivered via molecular simulation. A current unmet challenge lies in forging links between predicted adsorption free energies derived from enhanced sampling simulations with the conformational ensemble of the peptide and the water structure at the surface. To meet this challenge, here we use an in situ combination of Replica Exchange with Solute Tempering with Metadynamics simulations to predict the adsorption free energy of a gold-binding peptide sequence, AuBP1, at the aqueous Au(111), Au(100)(1 × 1) and Au(100)(5 × 1) interfaces. We find adsorption to the Au(111) surface is stronger than to Au(100), irrespective of the reconstruction status of the latter. Our predicted free energies agree with experiment, and correlate with trends in interfacial water structuring. For gold, surface hydration is predicted as a chief determining factor in peptide–surface recognition. Our findings can be used to suggest how shaped seed-nanocrystals of Au, in partnership with AuBP1, could be used to control AuNP nanoparticle morphology. |
format | Online Article Text |
id | pubmed-5669244 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-56692442018-02-15 Facet selectivity in gold binding peptides: exploiting interfacial water structure Wright, Louise B. Palafox-Hernandez, J. Pablo Rodger, P. Mark Corni, Stefano Walsh, Tiffany R. Chem Sci Chemistry Peptide sequences that can discriminate between gold facets under aqueous conditions offer a promising route to control the growth and organisation of biomimetically-synthesised gold nanoparticles. Knowledge of the interplay between sequence, conformations and interfacial properties is essential for predictable manipulation of these biointerfaces, but the structural connections between a given peptide sequence and its binding affinity remain unclear, impeding practical advances in the field. These structural insights, at atomic-scale resolution, are not easily accessed with experimental approaches, but can be delivered via molecular simulation. A current unmet challenge lies in forging links between predicted adsorption free energies derived from enhanced sampling simulations with the conformational ensemble of the peptide and the water structure at the surface. To meet this challenge, here we use an in situ combination of Replica Exchange with Solute Tempering with Metadynamics simulations to predict the adsorption free energy of a gold-binding peptide sequence, AuBP1, at the aqueous Au(111), Au(100)(1 × 1) and Au(100)(5 × 1) interfaces. We find adsorption to the Au(111) surface is stronger than to Au(100), irrespective of the reconstruction status of the latter. Our predicted free energies agree with experiment, and correlate with trends in interfacial water structuring. For gold, surface hydration is predicted as a chief determining factor in peptide–surface recognition. Our findings can be used to suggest how shaped seed-nanocrystals of Au, in partnership with AuBP1, could be used to control AuNP nanoparticle morphology. Royal Society of Chemistry 2015-09-01 2015-06-23 /pmc/articles/PMC5669244/ /pubmed/29449926 http://dx.doi.org/10.1039/c5sc00399g Text en This journal is © The Royal Society of Chemistry 2015 http://creativecommons.org/licenses/by/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution 3.0 Unported License (http://creativecommons.org/licenses/by/3.0/) which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Chemistry Wright, Louise B. Palafox-Hernandez, J. Pablo Rodger, P. Mark Corni, Stefano Walsh, Tiffany R. Facet selectivity in gold binding peptides: exploiting interfacial water structure |
title | Facet selectivity in gold binding peptides: exploiting interfacial water structure
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title_full | Facet selectivity in gold binding peptides: exploiting interfacial water structure
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title_fullStr | Facet selectivity in gold binding peptides: exploiting interfacial water structure
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title_full_unstemmed | Facet selectivity in gold binding peptides: exploiting interfacial water structure
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title_short | Facet selectivity in gold binding peptides: exploiting interfacial water structure
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title_sort | facet selectivity in gold binding peptides: exploiting interfacial water structure |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5669244/ https://www.ncbi.nlm.nih.gov/pubmed/29449926 http://dx.doi.org/10.1039/c5sc00399g |
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