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Evaluating causes of error in landmark-based data collection using scanners

In this study, we assess the precision, accuracy, and repeatability of craniodental landmarks (Types I, II, and III, plus curves of semilandmarks) on a single macaque cranium digitally reconstructed with three different surface scanners and a microCT scanner. Nine researchers with varying degrees of...

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Autores principales: Shearer, Brian M., Cooke, Siobhán B., Halenar, Lauren B., Reber, Samantha L., Plummer, Jeannette E., Delson, Eric, Tallman, Melissa
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5669428/
https://www.ncbi.nlm.nih.gov/pubmed/29099867
http://dx.doi.org/10.1371/journal.pone.0187452
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author Shearer, Brian M.
Cooke, Siobhán B.
Halenar, Lauren B.
Reber, Samantha L.
Plummer, Jeannette E.
Delson, Eric
Tallman, Melissa
author_facet Shearer, Brian M.
Cooke, Siobhán B.
Halenar, Lauren B.
Reber, Samantha L.
Plummer, Jeannette E.
Delson, Eric
Tallman, Melissa
author_sort Shearer, Brian M.
collection PubMed
description In this study, we assess the precision, accuracy, and repeatability of craniodental landmarks (Types I, II, and III, plus curves of semilandmarks) on a single macaque cranium digitally reconstructed with three different surface scanners and a microCT scanner. Nine researchers with varying degrees of osteological and geometric morphometric knowledge landmarked ten iterations of each scan (40 total) to test the effects of scan quality, researcher experience, and landmark type on levels of intra- and interobserver error. Two researchers additionally landmarked ten specimens from seven different macaque species using the same landmark protocol to test the effects of the previously listed variables relative to species-level morphological differences (i.e., observer variance versus real biological variance). Error rates within and among researchers by scan type were calculated to determine whether or not data collected by different individuals or on different digitally rendered crania are consistent enough to be used in a single dataset. Results indicate that scan type does not impact rate of intra- or interobserver error. Interobserver error is far greater than intraobserver error among all individuals, and is similar in variance to that found among different macaque species. Additionally, experience with osteology and morphometrics both positively contribute to precision in multiple landmarking sessions, even where less experienced researchers have been trained in point acquisition. Individual training increases precision (although not necessarily accuracy), and is highly recommended in any situation where multiple researchers will be collecting data for a single project.
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spelling pubmed-56694282017-11-17 Evaluating causes of error in landmark-based data collection using scanners Shearer, Brian M. Cooke, Siobhán B. Halenar, Lauren B. Reber, Samantha L. Plummer, Jeannette E. Delson, Eric Tallman, Melissa PLoS One Research Article In this study, we assess the precision, accuracy, and repeatability of craniodental landmarks (Types I, II, and III, plus curves of semilandmarks) on a single macaque cranium digitally reconstructed with three different surface scanners and a microCT scanner. Nine researchers with varying degrees of osteological and geometric morphometric knowledge landmarked ten iterations of each scan (40 total) to test the effects of scan quality, researcher experience, and landmark type on levels of intra- and interobserver error. Two researchers additionally landmarked ten specimens from seven different macaque species using the same landmark protocol to test the effects of the previously listed variables relative to species-level morphological differences (i.e., observer variance versus real biological variance). Error rates within and among researchers by scan type were calculated to determine whether or not data collected by different individuals or on different digitally rendered crania are consistent enough to be used in a single dataset. Results indicate that scan type does not impact rate of intra- or interobserver error. Interobserver error is far greater than intraobserver error among all individuals, and is similar in variance to that found among different macaque species. Additionally, experience with osteology and morphometrics both positively contribute to precision in multiple landmarking sessions, even where less experienced researchers have been trained in point acquisition. Individual training increases precision (although not necessarily accuracy), and is highly recommended in any situation where multiple researchers will be collecting data for a single project. Public Library of Science 2017-11-03 /pmc/articles/PMC5669428/ /pubmed/29099867 http://dx.doi.org/10.1371/journal.pone.0187452 Text en © 2017 Shearer et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Shearer, Brian M.
Cooke, Siobhán B.
Halenar, Lauren B.
Reber, Samantha L.
Plummer, Jeannette E.
Delson, Eric
Tallman, Melissa
Evaluating causes of error in landmark-based data collection using scanners
title Evaluating causes of error in landmark-based data collection using scanners
title_full Evaluating causes of error in landmark-based data collection using scanners
title_fullStr Evaluating causes of error in landmark-based data collection using scanners
title_full_unstemmed Evaluating causes of error in landmark-based data collection using scanners
title_short Evaluating causes of error in landmark-based data collection using scanners
title_sort evaluating causes of error in landmark-based data collection using scanners
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5669428/
https://www.ncbi.nlm.nih.gov/pubmed/29099867
http://dx.doi.org/10.1371/journal.pone.0187452
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