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Functional polymorphisms in the promoter region of miR-17-92 cluster are associated with a decreased risk of colorectal cancer
miR-17-92 cluster is identified as a potential oncogenic miRNA. The aim of this study was to investigate the association of polymorphisms in the promoter region of miR-17-92 cluster with the risk of colorectal cancer (CRC). Three polymorphisms (i.e., rs9588884, rs982873 and rs1813389) in the promote...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals LLC
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5669908/ https://www.ncbi.nlm.nih.gov/pubmed/29137282 http://dx.doi.org/10.18632/oncotarget.19753 |
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author | Sun, Ruifen Liang, Yundan Yuan, Fang Nie, Xinwen Sun, Hong Wang, Yanyun Yu, Tao Gao, Linbo Zhang, Lin |
author_facet | Sun, Ruifen Liang, Yundan Yuan, Fang Nie, Xinwen Sun, Hong Wang, Yanyun Yu, Tao Gao, Linbo Zhang, Lin |
author_sort | Sun, Ruifen |
collection | PubMed |
description | miR-17-92 cluster is identified as a potential oncogenic miRNA. The aim of this study was to investigate the association of polymorphisms in the promoter region of miR-17-92 cluster with the risk of colorectal cancer (CRC). Three polymorphisms (i.e., rs9588884, rs982873 and rs1813389) in the promoter of miR-17-92 were analyzed among 874 cases and 1132 controls using a TaqMan allelic discrimination assay or a polymerase chain reaction-restriction fragment length polymorphism method. Relative expression of miR-17-92 was examined among CRC tumors and noncancerous tissues using quantitative reverse transcription-PCR. Transcriptional activities were measured using dual-luciferase reporter assay. We found a significantly reduced CRC risk with the rs9588884 (GG vs. CC: adjusted OR = 0.46, 95% CI, 0.35-0.62; dominant model: adjusted OR = 0.72, 95% CI, 0.59-0.86; recessive model: adjusted OR = 0.53, 95% CI, 0.40-0.69) and the rs982873 (CC vs. TT: adjusted OR = 0.60, 95%CI, 0.46-0.80; recessive model: adjusted OR = 0.62, 95% CI, 0.49-0.80). Haplotype analysis showed that the GCG haplotype had a decreased risk for CRC compared to the CTA haplotype (adjusted OR = 0.67, 95% CI, 0.57-0.79). The rs9588884 GG displayed a lower level of miR-20a and the rs982873 CC displayed a lower level of miR-17. Additionally, the rare allele of rs9588884 G and the rs982873 C revealed a reduced luciferase activity. These findings indicate that the rs9588884 GG and the rs982873 CC in the promoter of miR-17-92 may protect against CRC, possibly by decreasing transcriptional activity and eventually resulting in lower levels of miR-20a and miR-17. |
format | Online Article Text |
id | pubmed-5669908 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Impact Journals LLC |
record_format | MEDLINE/PubMed |
spelling | pubmed-56699082017-11-09 Functional polymorphisms in the promoter region of miR-17-92 cluster are associated with a decreased risk of colorectal cancer Sun, Ruifen Liang, Yundan Yuan, Fang Nie, Xinwen Sun, Hong Wang, Yanyun Yu, Tao Gao, Linbo Zhang, Lin Oncotarget Research Paper miR-17-92 cluster is identified as a potential oncogenic miRNA. The aim of this study was to investigate the association of polymorphisms in the promoter region of miR-17-92 cluster with the risk of colorectal cancer (CRC). Three polymorphisms (i.e., rs9588884, rs982873 and rs1813389) in the promoter of miR-17-92 were analyzed among 874 cases and 1132 controls using a TaqMan allelic discrimination assay or a polymerase chain reaction-restriction fragment length polymorphism method. Relative expression of miR-17-92 was examined among CRC tumors and noncancerous tissues using quantitative reverse transcription-PCR. Transcriptional activities were measured using dual-luciferase reporter assay. We found a significantly reduced CRC risk with the rs9588884 (GG vs. CC: adjusted OR = 0.46, 95% CI, 0.35-0.62; dominant model: adjusted OR = 0.72, 95% CI, 0.59-0.86; recessive model: adjusted OR = 0.53, 95% CI, 0.40-0.69) and the rs982873 (CC vs. TT: adjusted OR = 0.60, 95%CI, 0.46-0.80; recessive model: adjusted OR = 0.62, 95% CI, 0.49-0.80). Haplotype analysis showed that the GCG haplotype had a decreased risk for CRC compared to the CTA haplotype (adjusted OR = 0.67, 95% CI, 0.57-0.79). The rs9588884 GG displayed a lower level of miR-20a and the rs982873 CC displayed a lower level of miR-17. Additionally, the rare allele of rs9588884 G and the rs982873 C revealed a reduced luciferase activity. These findings indicate that the rs9588884 GG and the rs982873 CC in the promoter of miR-17-92 may protect against CRC, possibly by decreasing transcriptional activity and eventually resulting in lower levels of miR-20a and miR-17. Impact Journals LLC 2017-07-31 /pmc/articles/PMC5669908/ /pubmed/29137282 http://dx.doi.org/10.18632/oncotarget.19753 Text en Copyright: © 2017 Sun et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/) 3.0 (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Sun, Ruifen Liang, Yundan Yuan, Fang Nie, Xinwen Sun, Hong Wang, Yanyun Yu, Tao Gao, Linbo Zhang, Lin Functional polymorphisms in the promoter region of miR-17-92 cluster are associated with a decreased risk of colorectal cancer |
title | Functional polymorphisms in the promoter region of miR-17-92 cluster are associated with a decreased risk of colorectal cancer |
title_full | Functional polymorphisms in the promoter region of miR-17-92 cluster are associated with a decreased risk of colorectal cancer |
title_fullStr | Functional polymorphisms in the promoter region of miR-17-92 cluster are associated with a decreased risk of colorectal cancer |
title_full_unstemmed | Functional polymorphisms in the promoter region of miR-17-92 cluster are associated with a decreased risk of colorectal cancer |
title_short | Functional polymorphisms in the promoter region of miR-17-92 cluster are associated with a decreased risk of colorectal cancer |
title_sort | functional polymorphisms in the promoter region of mir-17-92 cluster are associated with a decreased risk of colorectal cancer |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5669908/ https://www.ncbi.nlm.nih.gov/pubmed/29137282 http://dx.doi.org/10.18632/oncotarget.19753 |
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