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Embedding graphs in Lorentzian spacetime
Geometric approaches to network analysis combine simply defined models with great descriptive power. In this work we provide a method for embedding directed acyclic graphs (DAG) into Minkowski spacetime using Multidimensional scaling (MDS). First we generalise the classical MDS algorithm, defined on...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5673185/ https://www.ncbi.nlm.nih.gov/pubmed/29107967 http://dx.doi.org/10.1371/journal.pone.0187301 |
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author | Clough, James R. Evans, Tim S. |
author_facet | Clough, James R. Evans, Tim S. |
author_sort | Clough, James R. |
collection | PubMed |
description | Geometric approaches to network analysis combine simply defined models with great descriptive power. In this work we provide a method for embedding directed acyclic graphs (DAG) into Minkowski spacetime using Multidimensional scaling (MDS). First we generalise the classical MDS algorithm, defined only for metrics with a Riemannian signature, to manifolds of any metric signature. We then use this general method to develop an algorithm which exploits the causal structure of a DAG to assign space and time coordinates in a Minkowski spacetime to each vertex. As in the causal set approach to quantum gravity, causal connections in the discrete graph correspond to timelike separation in the continuous spacetime. The method is demonstrated by calculating embeddings for simple models of causal sets and random DAGs, as well as real citation networks. We find that the citation networks we test yield significantly more accurate embeddings that random DAGs of the same size. Finally we suggest a number of applications in citation analysis such as paper recommendation, identifying missing citations and fitting citation models to data using this geometric approach. |
format | Online Article Text |
id | pubmed-5673185 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-56731852017-11-18 Embedding graphs in Lorentzian spacetime Clough, James R. Evans, Tim S. PLoS One Research Article Geometric approaches to network analysis combine simply defined models with great descriptive power. In this work we provide a method for embedding directed acyclic graphs (DAG) into Minkowski spacetime using Multidimensional scaling (MDS). First we generalise the classical MDS algorithm, defined only for metrics with a Riemannian signature, to manifolds of any metric signature. We then use this general method to develop an algorithm which exploits the causal structure of a DAG to assign space and time coordinates in a Minkowski spacetime to each vertex. As in the causal set approach to quantum gravity, causal connections in the discrete graph correspond to timelike separation in the continuous spacetime. The method is demonstrated by calculating embeddings for simple models of causal sets and random DAGs, as well as real citation networks. We find that the citation networks we test yield significantly more accurate embeddings that random DAGs of the same size. Finally we suggest a number of applications in citation analysis such as paper recommendation, identifying missing citations and fitting citation models to data using this geometric approach. Public Library of Science 2017-11-06 /pmc/articles/PMC5673185/ /pubmed/29107967 http://dx.doi.org/10.1371/journal.pone.0187301 Text en © 2017 Clough, Evans http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Clough, James R. Evans, Tim S. Embedding graphs in Lorentzian spacetime |
title | Embedding graphs in Lorentzian spacetime |
title_full | Embedding graphs in Lorentzian spacetime |
title_fullStr | Embedding graphs in Lorentzian spacetime |
title_full_unstemmed | Embedding graphs in Lorentzian spacetime |
title_short | Embedding graphs in Lorentzian spacetime |
title_sort | embedding graphs in lorentzian spacetime |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5673185/ https://www.ncbi.nlm.nih.gov/pubmed/29107967 http://dx.doi.org/10.1371/journal.pone.0187301 |
work_keys_str_mv | AT cloughjamesr embeddinggraphsinlorentzianspacetime AT evanstims embeddinggraphsinlorentzianspacetime |